Detail



ID : Ahg926838

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|926838|scaffold_202399.1
Sequence
GGTTACGATT ATTCTCCTTA ATGGGTCCTC CTCTGCTTCC AAAACATGTA ACTGCAGTTA TAAGATGTCA GAAGGATCCT ATGAAAGCTC TAGAAATGTT CAATTCGATG AGAAAAGAGG ATGGTTTCAA GCATACTTTA TCTACTTACC GCAGTATCAT CGAAAAGCTT GGCCTTTATG GAAAATTCGA AGCCATGGAA GAGGTTTTAG TGGATATGCG TCAGAATGTT GGTAACCATA TGCTTGAAGG GGTTTATGTT GGGGCGATGA AGAATTATGG TAGGAAAGGG AAAGTTCAAG AAGCTGTTAA TGTGTTTGAA AGGATGGATT TTTATGATTG TGAGCCTACG GTTTTCTCTT ATAATGCTAT TATGAGTATA TTGGTTGATA GTGGTTACTT TGATCAAGCT CACAAGGTGT ATATGAGGAT GCGTGATAGA GGAATAACGC CTGATGTTTA CTCGTTTACG ATTAGGATGA AGTCTTTTTG CAGGACGAGT CGGCCTCACG CTGCTTTGAG GCTTCTTAAT AATATGTCTT CTCAAGGCTG TGAGATGAAT GTGGTTGCTT ATTGTACTGT GGTTGGTGGG TTTTATGAGG AGAATTTTAA GGTTGAGGCA TATGAGTTGT TTGGGAAGAT GCTTGCATCG GGTGTTTCGC TTTGCCTTAG TACGTTTAAC AAGCTTCTAC ATGTTCTTTG CAAGAAAGGA GATGTTAAGG AGTGTGAAAA ACTACTGGAT AAAGTTATCA AAAGAGGTGT TTTACCGAAT CTGTTTACTT ATAATTTTTT CATTCAAGGG CTGTGTCAGA AAGGTGAGCT TGATGCTGCT GTTCGTATGG TAGGTCGTCT CATAGATCAG GGGCCAAAAC CAGATGTGGT CACGTATAAC TATCTAATAT ATGGCTTATG TAAAAATTCC AAGTTTCAGG AGGCAGAGGT TTACTTAGGC AAAATGGTGA ATGAAGGACT TGAGCCTGAT AGTTTTACCT ATAACACACT AATAGCTGGA TATTGCAAAG GTGGAATGGT GCAACTTGCA GAACGGATTC TAGGTAATGC TGTTTTCAAT GGGTTTGTCC CCGACGAGTT TACATATCGC TCCTTAATTG ACGGATTGTG TCACGAAGGT GAAACAAACC GTGCTTTAGC TTTATTTAAT GAGGCCTTAG GGAAAGGAAT AAAGCCTAAC GTGATTCTTT ACAACACACT GATCAAGGGA TTGTCTAACC AGGGTTTGAT TCTGGAGGCT GCTCAGTTGG CGAGTGAAAT GTCTGAAAAG GGTTTGATTC CCGAGGTACA GACTTTTAAC ATACTCGTAA ATGGATTATG CAAGATGGGA TGTGTTTCTG ATGCTGATGG TCTTGTTAAA GTCATGATCT CCAAAGGGTA CTTTCCTGAC ATATTTACTT TCAACATTTT GATTCATGGT TATTCTACAC AGTTGAAAAT GGAAAACGCA CTTGAGATCT TAGATGTTAT GATGGACAAC GGTGTTGATC CTGACGTGTA CACTTACAAC TCTTTGTTGA ATGGTCTCTG CAAAACTTCA AAGTATGAAG ATGTGATGGA AACATATAAA ACTATGGTGG AGAAAGGTTG TGCCCCTAAC TTATTCACTT TTAATATACT TCTGGAGAGT CTATGTAGAT ACCACAAACT AGATAAAGCC TTGGGGTTAT TGGAGGAAAT GAAAAACAAG AGTGTGAATC CAGATGCGGT TACGTTTGGA ACGTTGATTG ACGGGTTCTG CAAAAACGGA GACTTGGATG GAGCATACAC ACTATTCCGG AAAATGGAAG AGGTTTATAT GGTTTCATGT TCAACGCCAA CATATAATAT CATTATTCAT GCTTTCACGG AGAAGCTAAA TGTTACTATG GCGGAAAAGC TATTCCAAGA GATGGTTGAT CGTTGTCTTG GTCCTGATGG ATACACATAC CGGCTTATGG TTGATGGTTT TTGCAAAACG GGAAATGTCG ATTTGGGGTA CAAGTTTCTA CTGGAGATGA TGGAAAATGG GTTTATTCCA TCGCTCACAA CGCTTGGACG TGTAATAAAC TGTCTTTGTG TGGAGGATAG AGTTTATGAG GCTGCCGGTA TTATCCATCG GATGGTCCAG AAAGGACTGG TCCCTGAGGC TGTGAACACC ATTTTTGATC ATGACAAAAA GGAGGTAGCT GCTCCTAAGC TTGTCTTGGA GGATCTGTTG AAGAAGAGCT GTATTACATA TTATGCTTAC GAACTTCTTT TTGATGGCCT TAGAGATAAA AGGCTACGCA AGAAAAAGGG TTTCACAGTG GTAGCCATAT GAATCTGCTG CAGTGGACTT CA 
Length2332
Protein Sequence
Protein Residue
Map Locationscaffold_2: 15383344.. 15385675
Download Sequence
A.thaliana
AGI-codeAT1G74580.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
24.1868 Ahg943674 transducin family protein / WD-40 repeat family protein
60.3987 Ahg916681 Transducin/WD40 repeat-like superfamily protein
60.663 Ahg910348 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
63.9453 Ahg489259 Protein kinase superfamily protein
88.9944 Ahg910406 receptor like protein 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression