| Annotation |
|---|
| Description | jgi|Araly1|943674|scaffold_604218.1 |
| Sequence |
CTACTTTGAA GCTGAAGTCG CACATGGAAC TCGATCTCGA CTCGTTCCTC GTATCGGACT CAGATTCCGA TTCCGATTTG GATTCTTCCT CCGTTCCTCA CCGTACAGTC GACGAAATTC TCAACGCGTC AAGTTCTTCA TCTCCTTCGT CTTCTCCTCC TCCTTCACCG CCGTCAATTA ACCGGCTGAA ACAAGACGAT CCGAATCGCC GCTTATCAGA AGCCCTTACT AACGTTGCCG TGGTGAGACC TGAATCTGAA TTACATCGCG GATTTCCTCC GACGCGGCGA AATTCGACAT CTTCTTCTTC TTTGAGACAG TTGCCTTTGC CGTCGCTATT CGCAGGAGTA AGGTCGAATG TGAAGCCTGG TGCGGCGCTT GCGGCGGCTG TGGCTGCTTC TAGATTGGTT CCTACACCAC ACGCTGCTAT TATCAAGTCA AGGAGAGCTA GCAGTGCGAG TAGCGAATTG CTGCAGCAGG TTTCAAATCA AGAGGAAGAA GATCAGGAGG TACTTTCTTC TAATGGAGAT TCTGTTGGAG TTGCTGCTGG ATCCGTTTCT GTTGATGATT TTCGTTCTTT CGGTGGAGAA TCTCGGATGG AGGATGAGGA TAATGGAGTT GCTGGTGTGG CAAGTCAAGA AGACGAAGCT AAAGTAATGG AAGTTCAAGC TAGTCATATT ACTGAGAGCT TAGTTGATAC CCGTGATTAT GAGGCAAACT CAAAGCCTGA CTTAGTCACT GCCTCCTCTG GTTTTGATGC TGAAGGAAAC GTCTCTGCAG AGCAAGATGC GAAGACAACA ACCGAAGCCG GAAATGCTGC TGTGGATGAC GACAAAGATG AGACAATGTT AATCGCTTCT TTGGTGGAGT CTTCAGAATC TCAACGTTTG AATGATTCTG AGGGGAAGTG CTATGATGCT AAGGTAAGCA ATGATGAAGA CTCAAGTGTT ATAGATGTTA AGAGTGATAA ATCAGATATA ATTATACCGG ATTCTAAAGA AGAGGGAGGT GATGCTTTTA TCCCTGATGA TGGAAGCTCG ATGTCTGGCA TTTCAGAGCT TGTAGAAGAA AGGATTGTTG AGTTGGAAAA CGAAAGGATG AGTAAAAGAG AGAAATTAAA ATCGCAATCT TTTAGGAAGC AGCTTGTGTT GGCTGAAGAG TTTGAGAAGA AACAAGCATA TACTGGTTTG CATTGGGAGG AAGGGGCTGC TGCTCAGCCA ATGAGACTTG AGGGTGTTAA GATCGGTTCG ACGAATTTAG GTTACTTTGA TGTCGATGCT GACAATGTCA TCAGCCGGAC CATTTCATCG CAGGCATTTA AGCGAGACCA TGGTTCTCCT CAGGTTTTGG CTGTTCATTT GAATTACATT GCAGTGGGTA CGTCCAAGGG GGTCATTGTC GTTATACCAA GTAAATATTC CTCTGATACT GCAGATCAAA TGGAATCAAA GATGATTTGG CTTGGTTTAC AAGGAGAGAG GTCCCAGTCC CCGGTTACCT CAGTTTGCTT CAATCAGATA GGGAGCCTCC TGCTAGCAGG TTATGGTGAT GGACATGTTA CAGTTTGGGA CATGCAGAGA GCGTCGATAG CAAAAGTGAT CACTGAACAT ACTGCACCAG TAGTATATGC CTTTTTTCTA GGCCGGGATT CTCAGGGTTC TCGCATATTT AAAGTTATTA CAAGTGATAC TAAGGGTGTT GTTTTCAAAC ACACTTTTTC TTGGGCCCTG CTGTTGAACA TGTATACAGT GAAAACGCAG TGTCTCCTTG ATGGACAAAA AAATGGAACA GTCCTCTCGG CATCACCTTT GCCTGATGAA ATTTTTGGAA GCTCCTTGGC CTCTTCTAAG GGGGGTAACT CTGCAGTTCC ATCCAGCAGT ATAAGTAGCA TGATGGGAGG TGTTGTTGGG GTCGATTCGA CTTGGAAGCT CTTTAATGAG GATTCAATTT CGGTGGAAGA AGGTGTTGTC ATATTTGCCT CCTATCAAAC TGGACTAGTG GTAAAGCTCA TTCCAGATTT GGAGGTGTAT GCACAACTTC CTCGGCCAGA AGGGGTTCGG GAGGGTTCCA TGCCATACAC TGCCTGGAAA TGCTCAACAG GTAATTCTTC TCCTGAAAAT TATTCTAAGG AGGCAGAAGA TAGGGTTTCT TTTCTTGTCA TTGCCTGGGA TCGTAGAGTT CAGGTTGCCA AGTTGGTAAA ATCAGACCTA AAGGAATATG CCAAATGGTC ACTTGACAGT CCAGCTATTG GTGTGGTTTG GCTAGATGAC CAGTTGCTGG TGATCCCAAC TGTGACGGGG CATTTGTATC TGTTCACAAG AGATGGTGTG GTAATTCATC AGACAAACTT TTTGGTGGCT GGTTCTTCAG GGAATGACCT AATTTCCTAT CATACGTACT TTACGAATGT CTTTGGAAAT CCTGAGAAAG CTTATCACAA CTCTATGGGT GTCAGAGGGG CTTCAGTATA CATTCTCGGG ACTGGGCATC TTGTTATCTC CAGACTTTTG CCGTGGAAGG AGCGGGTTGA TGTGTTAAGG AGAGGAGGTG ACTGGATGGG TGCATTTAAC ATGGCAATGT CACTTTTTAA TGGTCAAGCT CATGGAGTTG TTGACCTCCC CAAAACTGTG GATGCTATAA GGGAAGCCAT AGCACCCAGT TTAGCAGATT TGCTGCTTTC CTACGTAGAT GAAGTATTTT CTTATATCTC AATAGCATTT TCCAATCAGA TTGAAAAAAA TGGAGTGACT CATGAGCCAA GCAGTGGAAC CAATAATGTC AATTTAGAGA TAGAAGAACA ATACAATCGT GTTGGTGGTG TTGCCGTTGA ATTCTGTGTT CATATTAACA GGATGGATTT GCTCTTTGAT GAAATATTTT CCAGATTTGT GGCTGTACAA CAAAGAGGTA TATATTTCAC ATCTATATGT ATGTGTATCA ACTTCCTGTT TTGGGCTACA TTTTATTACG GAACAGGGTT CAGTATCATT CCAACTAGGT TTACTACGTT AGGATTGAGA CTAGTTCTCT ATAGGTTGCT TGGTTCTGTG TCTTTATTCT TTAAACTTCG TAGAGAGCTT TGGTCTACCG ATCTTGGAAT ATCTTATGTT GGTCTCGCCT TTGGGGATAT GCTTGGATCT CTTCCTCCAG AGATTATGCA AGCGCTGGTA GAACATTATA GCAGGAAAGG ATGGCTACAA AGAATTGAGC AGTGTGTTCT TCACATGGAT ATTTCTTCCT TAGATTTCAA TCAGGTAGTC AGAATTTGCC GTGAGCATGG GCTTTATGGG GCCTTGCTCT ATCTTTTCAA CAAAGGGTTG GATGATTTCA GGTCACCTCT GGAGGAGCTC TTGATTGTAT TACGGAACAG TGAGAAACAA AGGGCTATAG CCATTGGGTA TGTTATGTTA AGTCGTTGCA CTTTGTTTTG GCTTTATAAA ACTTTATGTG CAAAACTGAT CTCGAGTGCC CCCTCCTCAC TTGTTTCAGT CATGGACTAG AGGAAAACCT TAGAATTCAA |
| Length | 3520 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 23122358.. 23126838 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT4G00800.1 |
| Description | transducin family protein / WD-40 repeat family protein |
| TAIR curator summary | |
| Alias | [SETH5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg480005 | Helicase/SANT-associated, DNA binding protein |
| 2 |
Ahg482239 | |
| 3 |
Ahg925208 | binding |
| 4 |
Ahg492913 | VPS54 |
| 4.58258 |
Ahg927732 | Pentatricopeptide repeat (PPR) superfamily protein |
| 4.89898 |
Ahg481031 | Sec23/Sec24 protein transport family protein |
| 5.91608 |
Ahg934908 | ubiquitin-specific protease 5 |
| 5.91608 |
Ahg485847 | SNF2 domain-containing protein / helicase domain-containing protein / F-box family protein |
| 7.34847 |
Ahg483241 | Nucleoporin interacting component (Nup93/Nic96-like) family protein |
| 7.68115 |
Ahg356912 | Galactose oxidase/kelch repeat superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|