Detail



ID : Ahg927146

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927146|scaffold_202707.1
Sequence
TGTAAAACCC TAATTTTCCG ATGTCGATCT TCGAGTACAA TGGAAGTGCC GTCGTAGCTA TGGTAGGGAA GAACTGCTTC GCTATAGCCA GTGATCGGAG GCTTGGTGTA CAATTACAAA CCATCGCTAC CGATTTTCAG AGAATCTCTA AGATCCACGA TCATCTCTTC ATCGGACTTT CCGGTCTCGC CACCGATGTC CAGACATTGT ACCAGCGACT CGTATTTCGT CATAAGTTAT ATCAGCTTAG GGAAGAAAGA GACATGAAGC CAGAAACTTT CGCTAGTCTT GTATCTGCCA TTCTTTATGA GAAAAGATTT GGCCCATTCT TGTGCCAACC TGTGATTGCT GGACTGGGAG ATGATAACAA ACCCTTCATT TGCACTATGG ATTCGATTGG AGCCAAGGAG TTAGCTAAAG ATTTTGTTGT CTCTGGAACT GCTTCAGAAT CACTATATGG TGCCTGTGAA GCCATGTTCA AACCAGATAT GGAAGCTGAG GAATTGTTTG AGACAATTTC ACAAGCACTT CTCTCTTCAG TTGACCGCGA TTGTCTTAGT GGGTGGGGAG GTCATGTCTA CGTTGTAACA CCAAATGAGG TCAAGGAGAG AATCCTGAAG GGAAGGATGG ATTGATCTGA TATCACATAT CTGCT 
Length655
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16635521.. 16637314
Download Sequence
A.thaliana
AGI-codeAT1G77440.1
Description20S proteasome beta subunit C2
TAIR curator summaryEncodes beta subunit of 20s proteosome complex which is involved in protein degradation.
Alias[PBC2][20S proteasome beta subunit C2]
Gene coexpression
MR
MR Locus Description
11.0454 Ahg479016 Rubredoxin-like superfamily protein
21.2368 Ahg357624
21.9089 Ahg893922 SOH1 family protein
25.9422 Ahg935246 Ribosomal L38e protein family
38.8844 Ahg929571 lipoamide dehydrogenase 2
40.4969 Ahg942897 mRNAadenosine methylase
46.1302 Ahg921765 nuclear transport factor 2A
46.3249 Ahg486518 Phosphoglycerate mutase family protein
54.3507 Ahg352054 Uncharacterised conserved protein UCP009193
61.1964 Ahg474658 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression