Detail



ID : Ahg929571

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929571|scaffold_302028.1
Sequence
GAAGAAGAAC AAAACAACAA CAACGATGGC GATGGCGAGC TTAGCTAGGA GAAAAGCGTA CTTTCTCACC AGAAACATCT CCAATTCTCC CACTGACGCT CTCAGATTCT CTCTCTCCCT CACTCGCGGC TTCGCTTCGT CGGGATCCGA CGACAACGAC GTCGTCATCA TCGGCGGCGG TCCTGGAGGA TATGTGGCGG CGATTAAGGC GGCACAGCTC GGTCTCAAGA CAACCTGTAT CGAAAAGCGC GGCGCTCTCG GTGGTACTTG TCTTAACGTC GGCTGTATTC CTTCAAAGGC CCTTCTTCAC TCTTCTCACA TGTACCATGA AGCAAAGCAC GTTTTTGCTA ACCATGGTGT TAAGGTTTCT TCAGTTGAGG TAGATCTTCC TGCTATGTTG GCTCAGAAAG ACACAGCCGT CAAGAATCTC ACCCGTGGTG TCGAAGGTCT TTTCAAGAAG AACAAGGTAA ACTATGTTAA GGGCTACGGT AAGTTTCTGT CCCCATCAGA AGTCTCTGTG GACACAATCG ATGGAGAAAA CTTGGTTGTC AAAGGCAAAC ATATCATAGT TGCAACTGGC TCGGATGTCA AGTCTTTGCC AGGCATCACC ATCGATGAAA AGAAGATTGT CTCATCAACT GGGGCACTGT CTCTGACAGA AATCCCAAAG AAACTCATTG TCATTGGTGC TGGCTATATT GGGCTCGAGA TGGGTTCTGT ATGGGGACGG CTCGGATCAG AGGTCACAGT TGTTGAGTTT GCAGCGGATA TCGTACCAGC AATGGATGGT GAAATCCGCA AGCAGTTTCA ACGTTCACTA GAGAAGCAAA AGATGAAATT CATGCTCAAG ACTAAAGTCG TCGGCGTAGA TTCATCTGGA GATGGTGTGA AACTCATAGT GGAACCTGCT GAAGGTGGAG AGCAGACCAC TCTAGAAGCT GATGTGGTCC TCGTCTCAGC TGGTAGAACT CCGTTCACAT CTGGACTTGA TCTAGAGAAA ATCGGAGTTG AGACAGACAA AGGCGGGAGA ATTCTGGTGA ACGAGAGATT CTCGACAAAT GTTTCAGGCG TTTATGCAAT TGGAGATGTG ATTCCAGGAC CAATGCTGGC TCACAAAGCC GAAGAAGATG GTGTCGCATG TGTTGAGTTT ATAGCAGGCA AACACGGTCA TGTGGATTAC GACAAAGTCC CTGGGGTTGT CTACACGTAC CCTGAAGTTG CCTCAGTTGG TAAAACCGAG GAGCAGCTGA AGAAAGACGG TGTAAGCTAC AATGTCGGAA AATTCCCATT CATGGCCAAT AGCAGAGCCA AGGCCATAGA CACAGTAGAG GGACTGGTCA AGATTTTGGC TGATAAAGAG ACAGACAAGA TCTTGGGAGT TCACATTATG TCACCAAACG CAGGAGAATT GATCCATGAG GCGGTTCTAG CTATCAACTA TGATGCATCA AGCGAAGACA TTGCTCGAGT CTGTCACGCT CATCCCACCA TGAGTGAGGC TATCAAGGAA GCTGCCATGG CTACCTATGA CAAGCCCATT CACATGTAGA AGCTCTCAGG TATATCATGG AGATGTGGAT TGAGGGAGAA GGAAGTAAAG CCGC 
Length1604
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6925189.. 6927331
Download Sequence
A.thaliana
AGI-codeAT3G17240.1
Descriptionlipoamide dehydrogenase 2
TAIR curator summarylipoamide dehydrogenase precursor
Alias[mtLPD2][lipoamide dehydrogenase 2]
Gene coexpression
MR
MR Locus Description
2 Ahg488483 Vps51/Vps67 family (components of vesicular transport) protein
2.44949 Ahg470757 CCCH-type zinc fingerfamily protein with RNA-binding domain
2.64575 Ahg476749 PAM domain (PCI/PINT associated module) protein
3.31662 Ahg485968 2-oxoglutarate dehydrogenase, E1 component
3.87298 Ahg939058 eukaryotic translation initiation factor 4G
4.89898 Ahg476131 DEAD/DEAH box helicase, putative
5.09902 Ahg482209 26S proteasome regulatory complex, non-ATPase subcomplex, Rpn2/Psmd1 subunit
6.48074 Ahg315447 ILITYHIA
10 Ahg929670 MAP kinase 9
10.4881 Ahg481886 pleckstrin homologue 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression