Detail



ID : Ahg927211

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927211|scaffold_202772.1
Sequence
TTTTTCCGCA TTTCGAAGCC ATGGCTAAAC TGCTTCTTCT TCTCCTTCTC TTCATATTTC ACAGCGTCGA ATCAGCTCCT CCGCCGCACT CCTGTGACCC TTCGAATCCA ACCACCAAAC TCTACCAGTT CTGCCGCACT GACCTCCCAA TTAGCCAACG AGCGCGTGAT CTCGTCTCGA GGCTAAACAT TGACGAGAAG ATATCGCAGT TGGGGAACAC AGCTCCGGGG ATACCACGTC TTGGAGTTCC GGCGTACGAG TGGTGGTCGG AGGCTTTACA CGGCGTAGCC TACGCCGGTC CAGGAATCCG GTTTAACGGA ACGGTTAAAG CAGCCACTAG CTTTCCTCAA GTCATCTTAA CCGCTGCTTC CTTCGACTCC TATGAATGGT TCCGCATTGC TCAAGTTATA GGAAAGGAAG CAAGAGGAGT GTACAACGCA GGGCAAGCGC AAGGGATGAC ATTTTGGGCA CCAAACATTA ACATATTTAG AGATCCACGG TGGGGAAGAG GCCAAGAGAC TCCCGGCGAG GATCCGCTAA TGACCGGAAC TTACGCGGTG GCTTACGTCA GAGGATTACA AGGCGACTCT TTCGACGGTC GGAAAACACT ATCCAATCAT CTCCAAGCCT CCGCTTGTTG TAAGCATTTC ACGGCGTACG ATCTTGATCG TTGGAAAGGT ATCACTCGCT ACGTCTTTAA TGCTCAGGTG AGTTTGGCTG ACTTGGCGGA GACGTACCAA CCACCATTCA AGAAATGCAT AGAAGAAGGC CGAGCCAGTG GCATCATGTG TGCTTATAAC CGAGTCAACG GCATTCCCTC TTGCGCTGAT CCAAATCTCT TGACTCGAAC CGCTCGTGGG CTCTGGCGTT TCAGCGGATA CATTACTTCA GATTGTGACG CAGTCTCAAT CATCCACGAT GCTCAAGGCT ACGCCAAAAC CCCTGAAGAC GCCGTTGCTG ATGTCCTCAA AGCCGGCATG GACGTAAACT GTGGATCATA CTTACAAAAA CATACCAAAT CAGCTCTTCA ACAGAAGAAA GTGTCTGAAA CAGACATTGA CAGAGCTCTG CTCAATCTTT TCGCTGTTAG GATTCGTCTC GGTCTCTTCA ACGGCGATCC AAACAAACTA CCTTACGGAA ACATTAGTCC TAACGATGTT TGTTCTCCGT CTCATCAAGC TTTAGCACTC GAAGCTGCTC GTAACGGTAT AGTTCTCTTG AAGAACAATC TTAAACTCCT TCCTTTCTCC AAACGCAGCG TTTCGTCTTT AGCTGTAATC GGTCCAAACG CTCACGTCGC TAAAACGCTT CTTGGAAACT ATGCTGGTCC GCCTTGTAAG ACTGTGACTC CCCTTGATGC CTTACGTAGT TATGTCAAAA ACGCTGTTTA CCACAATGGT TGTGATTCCG TGGCTTGCTC TAACGCTGCG ATTGATCAAG CGGTTGCAAT CGCGAGAAAT GCTGATCATG TGGTTTTGAT CATGGGACTA GACCAGACTC AAGAGAAAGA AGATATGGAC CGTGTGGACC TTAGTCTTCC CGGGAAGCAA CAAGAGCTCA TTACAAGCGT TGCGAATGCT GCAAAGAAAC CTGTGGTTCT TGTTCTGATA TGTGGCGGTC CTGTCGATAT CTCATTTGCT ACGAATAACG ATAAGATCGG AAGCATTATG TGGGCTGGTT ATCCTGGAGA AGCCGGAGGG ATTGCTCTTG CTGAAATCAT CTTCGGAGAT CACAATCCGG GAGGAAGATT ACCAGTGACT TGGTATCCTC AGAGCTTTGT GAATGTACAG ATGACAGACA TGAGAATGCG GTCTGCAACT GGATATCCTG GAAGGACTTA CAAATTCTAC AAAGGCCCTA AAGTGTTTGA GTTTGGACAT GGTCTTAGCT ACTCAACTTA CTCATACCGG TTCAAGACTC TGGGTGCAAC CAATCTCTAC TTGAACCAAT CTAAAGCTCA ACTCAACTCG GACTCTGTTC GGTACACTCT GGTTTCGGAA ATGGGGGAAG AAGGTTGCAA CATAGCCAAG ACTAAGGTTA TTGTTACAGT GGAGAATCAA GGTGAGATGG CGGGAAAACA TCCGGTGCTG ATGTTTGCGA GGCACGAGAG AGGAGGAGAA GACGGGAAAC GCGCAGAGAA ACAACTTGTC GGGTTTAAGA GCATTGTGCT AAGTAATGGA GAGAAAGCGG AGATGGAATT TGAGATTGGT CTTTGTGAGC ATTTGAGCAG AGCTAATGAA GTTGGAGTTA TGGTTGTTGA AGAAGGAAAA TATTTCTTAA CCGTTGGAGA TTCAGAGCTC CCTCTTATTG TTAATGTCTG AATCTGAAAA CATAAACAAG A 
Length2341
Protein Sequence
Protein Residue
Map Locationscaffold_2: 16952294.. 16955429
Download Sequence
A.thaliana
AGI-codeAT1G78060.1
DescriptionGlycosyl hydrolase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.1355 Ahg495241 subtilase 1.3
13.784 Ahg495659 FASCICLIN-like arabinogalactan 1
18.3576 Ahg470231 galacturonosyltransferase 5
19.4936 Ahg933364 expansin A6
20.6155 Ahg477915 Heavy metal transport/detoxification superfamily protein
23.0434 Ahg480375 arabinogalactan protein 9
23.2379 Ahg481792 Pathogenesis-related thaumatin superfamily protein
25.632 Ahg928939 Leucine-rich repeat (LRR) family protein
25.6905 Ahg479268 receptor-like kinase 902
26.2679 Ahg487523 Eukaryotic aspartyl protease family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression