Detail



ID : Ahg928939

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928939|scaffold_301396.1
Sequence
AGCATCCACA CAAAATCACA ATGAAGCTCC TTGTTCATCT CTCTATCTTC TTATCAATCC TCTTTGTCTC TCTCCCATCT TCTTACAGCT GCACCCCTAA TGACAAGAAT GCCCTCCTTC AAATCAAGAA ATTACTGAAC AACCCTCCCC TCCTCTCTTC CTGGAACCCC CGAACCGACT GTTGTACCGG CTGGACCGGC GTCGAATGCA CTAACCGTCG CGTTACAGCT CTCAGCGTTT CCTCCGGCGA AGTCTCCGGC CAGATCCCGT ACCAGATCGG CGACCTACTT GACCTCCGTA CACTCGATTT CAGCTACCTG ACCAACCTCA CAGGAAACAT CCCACGCACC ATTACCAAAC TCAAGAACCT CAACACTCTC TTCTTAAAGC ACACTAGTCT CTCCGGTCCG ATTCCTGATT ACATCAGCGA GCTCAAGAGC CTCACGTTCT TGGACCTTTC CTTTAACCAA TTTACCGGTC GAATTCCCGG TTCACTGTCT CAGATGCCGA AGCTTGAAGC CATTCAGATC AACGATAATA AGCTAACCGG CTCTGTACCG AATTCTTTCG GTTCTTTTGT TGGCAACGTC CCTAATCTCT ACTTGTCTAA CAATAAGCTT TCAGGAAAAA TACCGGAATC GTTGTCTAAA TACGACTTCA ACGCAGTGGA TCTGTCCGGA AATGGTTTCG AAGGAGATGG CTTCATGTTC TTCGGACGGA ACAAAACAAC AGTACGAGTG GATCTGTCGA GAAACATGTT TAATTTCGAT CTCGTCAAGG TTAAGTTCGC TAGAAGCATA GTTTCGTTGG ATCTGAGCCA TAACCATATA TACGGGAAGA TACCACCAGC GCTGACTAAA CTACACCTCA AGCATTTCAA CGTGAGCGAC AATCATCTCT GTGGAAAAAT CCCAAGTGGC GGTCTCCTTC AGACCTTTGA ACCATCTGCC TACGCTCACA ACATCTGTCT TTGTGGGACT CCCCTTAAGG CTTGTTAAGT TCGTTTTATC TTGGCGGA 
Length1018
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4641699.. 4642954
Download Sequence
A.thaliana
AGI-codeAT3G12145.1
DescriptionLeucine-rich repeat (LRR) family protein
TAIR curator summaryA novel leucine-rich repeat protein. Interacts directly with MADS domain transcription factor.
Alias[FLOR1][FLR1][FTM4][FLOR1][FLORAL TRANSITION AT THE MERISTEM4]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg496451 tubulin beta chain 2
4.69042 Ahg904107 Leucine-rich repeat (LRR) family protein
6 Ahg472193 chlorophyllase 1
7.28011 Ahg477915 Heavy metal transport/detoxification superfamily protein
7.87401 Ahg480375 arabinogalactan protein 9
8.66025 Ahg497154 FASCICLIN-like arabinogalactan 2
8.7178 Ahg932640 cytochrome P450, family 82, subfamily F, polypeptide 1
9 Ahg487502 polygalacturonase inhibiting protein 2
12 Ahg943148 Cupredoxin superfamily protein
12.4097 Ahg481792 Pathogenesis-related thaumatin superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression