Detail


ID : Ahg927313

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927313|scaffold_202874.1
Sequence
ATATATACAT ATATATCATT ATGTGGAAGT TGAAGATAGG AGAGGGAAAT GGAGAAGACC CTTACTTATT CAGCAGCAAC AACTTCGTCG GACGTCAAAC ATGGGAATTT GATCCCAAAG CCGGCACACC AGAGGAACGA GCCGCCGTCG AAGAAGCTCG CCGGAAATTT TTAGACAACC GTTCCCGTGT TAAAGGTTGC AGTGATCTCT TGTGGCGAAT GCAAGTGATT TTTGAAAGAG GCGAAATTCG AGCAAGTGAT CCCGCCGGTG AAGATCGACG ACGGCGACGT CATAACTTAC GAAAACGCGA CGAATGCGCT ACGGAGAGCA GTTTCTTTCT TCTCGGCTTT GCCTCCGATG GCCACTGGCC GGCGGAAATC GCAGGAACTC TCTTCTTCCT TCCTCCATTG GTTTTTTGTT TGTATATCAC AGGACACCTC GAGAAGATAT TCGATGCGGA ACATCGCAGC GAGATGCTTC GGCATATCTA TTGTCACCAG AACGAAGACG GTGGATGGGG ATTACATGTT GAGGGAGACA GCGTTATGTT TTGCACCGCA CTGAATTACA TATGCTTGCG TATGCTCGGA GAAGGTCCCA ATGGAGGGCG AGATAACTCC TGCAAACGGG CCAGGCAATG GATTCTTGAC CATGGTGGTG TGACTTATAT TCCTTCTTGG GGAAAATTTT GGCTCTCGAT ACTCGGAATC TATGATTGGT CTGGAACCAA CCCAATGCCT CCCGAGATTT GGTTGCTGCC TTCTTTCATT CCAATACACT TAGGAAAAAC TTTGTGTTAT ACCCGAATGG TTTATATGCC CATGTCTTAT CTGTATGGGA AACGATTTGT TGGTCCTCTT ACACCTCTTA TCATGCTATT GCGCAAAGAA CTCCACTTAC AACCTTATGA GGAAATCAAT TGGAACAAAG CGCGCCGTCT ATGTGCAAAA GAAGACATGA TTTATCCTCA TCCTCTGGTT CAAGATTTGT TATGGGACAC TCTTCACAAT TTTGTGGAGC CTTTCCTTAC AAGTTGGCCG TTAAAAAAAC TTGTACGGGA AAAGGCTCTT CGAGTGGCAA TGGAACACAT ACATTATGAG GATGAAAATA GCCATTATAT TACCATCGGA TGTGTTGAGA AGGTTCTGTG CATGCTTGCT TGCTGGATCG AGAATCCTGA TGGAGATCAC TTTAAGAAAC ATCTCGCTAG AATTCCGGAC TTGATGTGGG TAGCTGAAGA TGGACTGAAA ATGCAGAGCT TTGGAAGTCA ACTATGGGAC ACAGGGTTTG CGATTCAAGC TTTACTTGCT TGTGACCTTT CTGACGAAAC TGATGATGTA CTCAGGAAAG GACACAATTT CATAAAAAAT TCTCAGGTTA GAGAAAACCC TTCAGGTGAC TTTAAGAGCA TGTATCGCCA TATTTCCAAA GGAGCCTGGA CTTTGTCTGA TCGAGATCAT GGATGGCAAG TGTCAGATTG TACAGCTGAA GCTTTGAAGT GTTGCATGCT GCTCTCCTTG ATGCCAGCTG AGGTCGTTGG CCAGAAAATA GATCCTGAAC AACTATACGA TTCTGTTAAT CTCTTGTTAT CGTTGCAGGG TGAAAAAGGA GGTTTGACTG CATGGGAGCC TGTCCGTGCA CAAGAATGGT TGGAATTACT CAATCCCACA GATTTTTTTA CTAGTGTTAT GGCTGAACGC GAGTATGTAG AATGTACCTC AGCTGTTATT CAAGCTTTGG TTCTATTCAA ACAACTTTAT CCGGATCACA GAACGAAAGA GATCATCAAG TCGATTGAGA AAGGGGTGCA ATTCATAGAA AGCAAACAAA CGCCTGATGG TTCATGGTAT GGAAACTGGG GTATCTGTTT TATCTATGCG ACATGGTTTG CTCTGAGCGG GCTAGCAGCC GCTGGTAAAA CTTACAAAAG TTGTCTGGCT ATGCGCAAAG GTGTAGATTT CCTGCTTACG ATACAAGAAG AAGATGGTGG TTGGGGCGAA AGCCATCTGT CATGCCCTGA GCAGAGATAC ATACCATTAG AAGGGAACAG ATCAAACCTA GTGCAAACTG CATGGGCTAT GATGGGTTTG ATTCATGCCG GACAGGCCGA GAGAGATCCT ACACCTCTTC ATCGTGCTGC GAAACTTATC ATCACTTCGC AACTTGAAAA TGGGGACTTT CCGCAACAGG AAATATTAGG AGTATTCATG AATACATGCA TGCTACACTA TGCTACATAC AGAAACACCT TCCCCTTATG GGCACTCGCG GAATATCGAA AAGCTGCCTT CTTAACTCAT CAAGATCTAT AGCTCTTCCT GAATAATCTT TA
Length2332
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17388394.. 17392635
Download Sequence
A.thaliana
AGI-codeAT1G78960.1
Descriptionlupeol synthase 2
TAIR curator summaryEncodes a multifunctional 2-3-oxidosqualene (OS)-triterpene cyclase that can cyclize OS into lupeol, alpha- and beta-amyrin.
Alias[ATLUP2][LUP2][lupeol synthase 2]
Gene coexpression
MR
MR Locus Description
27.9821 Ahg484384 cytochrome P450, family 71, subfamily B, polypeptide 19
32.7719 Ahg311800 Neutral/alkaline non-lysosomal ceramidase
40.5093 Ahg487900 RING/U-box superfamily protein
44.9444 Ahg894415 CBL-interacting protein kinase 25
59.0254 Ahg487924 CBL-interacting protein kinase 5
66.3174 Ahg486058 Ca-2+ dependent nuclease
70.4486 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
76.8375 Ahg931273 UDP-glucosyl transferase 73B5
77.7496 Ahg934965 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
81.0925 Ahg943214 Tetratricopeptide repeat (TPR)-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression