Detail



ID : Ahg927402

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927402|scaffold_202963.1
Sequence
TTTGTACTAT TTTCTCATCC ATGGGTAGGC ACGAATACGA TAGTTCCTCC GAGGAAGAAG AGAGAGCTAG AAGAAGGGAT AGGAGAAGAC GAGAGAGAAG CCCAGATGTT AGACGATCGA GGACGGAGAC AGATGATGTT GCTCGTCGTG TTAGGGTTTC TGATGATGAG GACCATAAGA GCTCGCGACG AGATCTTGAG ATTGCTGGTG GTGAGAGGCG CCGTGGAGAT AAGGTTAGAA AAGAGACTTC TTCTGATGAG GAATTATCCA GGCGGTCGAG AAAGGATCGG AAAGAAGTAA ACTCCGGTTC TGAGGATGAT AGAGGTAAAA AAATTGAGGT AGATAGTGAT GCTGATGGTG AGAGGAGGGT GAGTAAGGGG AAAAATAAGG ATAGAGTTAG AGCTGGCACT TCTTCTGGTG AAGAAGCAGA TGATTCGAAG GGGAATAAAA AGGAAACTAT GGAGGTTGAA GAGGATTACG GTAGGAGTGG AAGGCGGAGA AGCCCCAAAG TCATGGAGAA ACATGGTAGA GAGAGAAGTC ATAGGGGTAG TAGAGTCATA GCTGATAAAC CTTCTGATGA AGAAGATGGT AGGCAGAGGA GCAGGGGAGG TAGGCGTGAA AGCGAGAGGA AACGCAGGGA TCATCGAGCA TCTGACGACG ACGAGGAAGG TGAGATTAGG AGTGAGAGAA AAGGAAAAGA GAGGAATGAT AGAGGTAATG AAGGTCTCTT AAAGAGGGAT CGGAGGGAGA GAGACTTGAC TGTTGGACAC GAGAATGGGA GTCGGCGTAG GGAAGTTGAA AGGCAAGAAA GGAGTCGGAG GGATGATGGA GTTAGAGATG AAAAAGAAAG GAGACACAAT TATAGATATG ATGATAGTCA AAGAGACAAG GTGAGAAAGG AAGATAGCAG GAAAAGGGAA GAGAAGATTG AGTTTCCAAA GCCCAAGCTG GCAGAACTCA ATCCATCTGA GAACAATGCT ATGGCCTTGG GAAAAACAGG AGGAGTTTAT ATTCCTCCGT TCAAGCTAGC ACGCATGATG AAGGAGGTGG AAGATAAGAG CAGCGTAGAG TATCAACGGC TTACATGGGA TGCTCTCCGT AAAAGTATTA ATGGGCTCGT GAATAAGGTT AATGCAAGCA ACATCAAGAA CATAATCCCT GAACTGTTTG CTGAAAATCT CATCAGAGGA AGGGGACTTT TCTGCCGTTC ATGTATGAAG TCTCAAATGG CATCTCCTGG ATTCACTGAT GTCTTTGCAG CCTTAGTCGC TGTTATTAAT GCCAAATTCC CTGAAGTTGC TGAACTTCTA TTGAAAAGGG TCATTTTGCA GCTAAAGAGA GCGTATAAGC GTAATGACAA GCCTCAATTG CTTGCTGCTG TAAAATTTAT AGCGCATCTA GTAAACCAGC AAGTCGCTGA GGAGATCATA GCACTTGAAT TAGTTGCTGT ACTTCTGGAA GAGCCGACTG ATGACAGTGT CGAGGTGGCT GTTGGGTTTG TGAGGGAGTG TGGTGCGATG CTTCAAGACG TTACACCAAA AGGATTGAAT GGGATTTTTG AGCGGTTTCG TGGTATACTG CACGAGGGAG AGATAGATAA GAGAGTTCAG TATTTGATAG AAAGTCTCCA TGCTACTAGG AAGGCGAAAT TTCAGGGACA TCCGGCCGTT CGTCCTGAGC TAGATCTTGT TGAAGAAAAA TATTCGCACG ATCTCTCTCT TAATCAAGAA ATTGATCCTG AAACTGCTCT TGATGTTTTC AAACCTGATC CTGACTTCGT TGAGAACGAA AAGAAATATG AGGCGCTGAA GAAAGAGTTA CTCGGTGACG AGGAGTCTGA GGATGACGAT GGCTCTGATG CTAGTTTAGA AGATAACGAT GAGGAGGAAG ATGAATCTGA TGAAGAAGAT GAAGAACAAA TGAGAATAAG AGACGAGACA GAGACTAATC TTGTTAATCT TAGGAGGACA ATCTACCTGA CCATAATGTC CAGTGTTGAT TTTGAGGAAG CAGGTCACAA ATTACTTAAA ATTAAGCTTG AACCAGGTCA AGAGATGGAA CTATGCATAA TGCTCCTGGA ATGTTGCTCT CAGGAGAGAA CTTATCTGCG TTACTATGGA TTGTTGGGTC AGCGTTTCTG TATGATCAAC AAAATTCATC AAGAGAATTT TGAGAAATGC TTTGTTCAGC AGTATTCCAT GATTCATCGT CTGGAGACAA ACAAATTGCG TAACGTGGCT AAGTTTTTTG CCCATTTACT GGGCACAGAT GCTCTCCCCT GGCATGTGCT TGCCTACATT CGGTTAACCG AGGAGGACAC AACTTCCTCA TCTCGTATCT TCATTAAGAT CCTATTCCAG GAATTGTCAG AACACTTGGG GATTAGGCTG CTTAATGAGA GGCTTCAGGA TCCAACAATG CAGGAATCAC TTGAATCTAT CTTCCCTAAG GATAATCCAA AGAACACTAG GTTTGCAATC AACTTCTTTA CATCCATTGG TCTTGGAGGC ATCACAGAGA ATCTCAGAGA GTATCTGAAG AACATGCCAA GCCTCATCAT GCAACAGCAG AAGCAAGTTG CGGAATCAGA ATCAGGATCA TCATCTGGAT CTGACAGTTC TGGTTCCGAG TCTGAATCTG AGTCAGACTC ATCATCTTCT TCTAGTTCGG ATGAAAGCGA CAGAGAGAAG AGGAAGCGAA GAAAAAGATC TTGAAGACTG TTCTGTTTGT TATC 
Length2734
Protein Sequence
Protein Residue
Map Locationscaffold_2: 17746787.. 17750535
Download Sequence
A.thaliana
AGI-codeAT1G80930.1
DescriptionMIF4G domain-containing protein / MA3 domain-containing protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Ahg946015 proline-rich spliceosome-associated (PSP) family protein
5.09902 Ahg484223 ATP/GTP-binding protein family
10.3923 Ahg473467 RING/FYVE/PHD zinc finger superfamily protein
13.2665 Ahg478482 DnaJ domain ;Myb-like DNA-binding domain
14 Ahg916256 KRR1 family protein
14.4914 Ahg484002 Exonuclease family protein
14.4914 Ahg489971 eukaryotic translation initiation factor 3A
17.5499 Ahg473006 Pre-mRNA-splicing factor 3
19.3649 Ahg492193 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
21.6333 Ahg488117 RNA helicase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression