Detail



ID : Ahg473467

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|473467|fgenesh2_kg.1__3421__AT1G32810.2
Sequence
ATGAGAGGAA GATCGTATCG GTTTTCGAGT ACGGATCCTC ATGAGGATTG GGGTAATGAA CTTTGGACTG TGGATTGTGT TTGTGGTGTG AATGACGATG ATGGAACAGA GATGGTTAAA TGTGATGATT GTGGTGTTTG GGTTCATACT CGTTGTTCTC GTTTTGTTAA AGAAGAAGAG CTTTTTACTT GTGATAAGTG TAAGAGCAAG AACAATATTA ACGATAGCGA GGAGACTGAG GTTGCTCAGT TGTTGGTTGA ATTGCCTACT AAAACCTTGA GAATGGAGAA TTCGTGTACT CGGGGTGTTC CGCCGAAGCG TCCTTTTAGG TTATGGACTG AGATCCCGAC CGAGGAAAAG GTTCATGTTC AAGGAATCCC GGGTGGGGAT CCGGCTCTTT TCGAAGGGTT GTCGTCGGTT TTCTCCCGGG AGCTGTGGAA GTGTACTGGT TATGTGCCGA AGAAGTTTAA CTTTAAGTAT AGAGAGTTTC CATGCTGGGA TGAGCAAGAG AAGGATGAGA TTGAAAATGA CGGTGCAGGG GTTTTGTTTT CTATGTCCAA GGAAAATGTG ATTGCTGCTC CTGTGAGTGC TTTGGTTGGA ATGAAGAGCC TAGATGGTAA AGGAACCAAT GATTTGAAGC TTGGTTGTGC AAAAGACGGC AATAGTTGGG ACTCTGGCGA AACAGATAGA AAACATTCTC AGGGTGCCAT GAAGAAGAAT AAGAGGTTGA TTCGTCCTAT GATCACGAAT AAACGAAGAA AAGAATTGTT TGGAGCTTCA AAAGAGCGGA TGAAGAAGAA GGCTGAAGGT GCAGAAAAAG AAGAAGATGA TAAGAAAGGG TTTGTCGGTA AAACAGGAAT TCGACCTGCC AGTGATTCTA AACCATCAGA ATCTCGTAAG GACATAGAAG CAGAAGGTTT TACAAGCGAC ATTGGGATCA CGAAGAGTGT AAAGGCCAAG AAAGCTTCTT TCGAAGAATC TAATAGTGGT GGCCTTGCTC TGGAAACTGG CGGTGATGAA TCTGGTAATA CAGAAATTGG TGTTGAATGC TCCAGAGAAC AGAATCTTTC TGACGTTCAT GCCAATGGTG CGGGAAAACA GGAAGAGAAA GCTGGTCATC ATTTTCGAAT TGTGCTTAAG AGCTCTGCAT CTACTGATCC TTCTGTCCTC GGAGGAAAAG ATGTTCCACA CAATGAGGCT AATAAGGAGG AGGAGAGACA AGGCACCGTA GCTGACGTTC CGGAAGATAA TGCAGTTGAT TCTTCTGAAA GTTCCCGGAA GCCTTCTCCT GTTTCCACGG TTGGTAAAAC GCGAGAAGGT GAAGAAAAAA TACACAGTGG GAAAGTCAGT TCTAGAAAGA ACAAATTCCA AAAAGAAACA GCTGATACTG GTGCCAGTGG AGCTGTAGGC CTGCAGACTC TAGACCCTAT GGATTCTAAA GTGTCAGGGA GCTCTGTATC TCAGATCTCT GGAGCTTCTG AACTTAACAA AATGACACCG GGCAGTTCAC TTCCTGATGA TCACAAACCG CAGCCTGTTG ATGTGGTATC AGAAGGAATA AGTAGTGGCA ATAGAAACAA AGCTATGGAA TTAAAACGAG AACTGGTGGT TTCGGAAGCA GAAAAAGATA TTCTGGAAAC AAAGCCTGAA TCTGGTTTAT TTCAAGAACC ATCAAAGCCT TTCAGACCTA TTCCCCACAC TGTTTCAGGA AATGGTAGGC CTAAGATGGT AGTATGCATT GGAAAAACAT CGTCAAGTTC AGCCACAGAA AAGTCTTCCC GCTCGAAGCA ACAACCATGT GATGATGCTG ATGCTAATAC CAATGATGAG GACTGTGTTT CCAGTGATGT GATCCGAGAG AGAGATGGGG ATGATGAACC TTCAGAGAAA GCTCCGAAAC ATCCTAAATT TTCTATTACC TCTAAGAAAT CGATGCAGCA TAATCGTACT TCCCATTCTT CAGTTTCCAA GACTAGAGAG TCTTCCTCTG CTTCAAAGAC ATCTTCAGCA GCTCGGATTA ACGGTGGTTC TTCCGAGGCT CCTAGTAAAC ATTCGCTTTC AGGGACCTTC CCGAAAAATG AAAAGCCTGG ACAATCAATA TTCCAGTCAT CAACTAAGAA TCCTGTGCAG TCTATAATTT CCCTTGCTCC AAATCTGAGC GATGAAGAGC TTGCGTTAAG ACTGCACCAT CAACTCAATA GCTCTCCGCG AGTTCCTCGT GTACCACGCC TGAGACAGCC TGGTAGCTTG CCCCTGTCTC CAACCGCTCC TAGTTTTAAG CGCACTTCTA GTTCTGGTAG CAAGGATCAC ACAACGTTTT CCAGAAGGAA AAACAAGGAT GCATCCAAAG AAGGTTACCG CAATTTACGT GATGATGATA GATGCAGTAC AAGGAGTGCC AAAACGCGTC GCTCTCCTGA TAGGAGAACA CAACAAGACA GTGGAAGCAG AGGGGGGAGT TTGTGTTCCA AAGGGGAAGA AAATGAAACC CCCAAAACCT CTTCTTACTC CTCTCGGAAA GTACTTCTCC CGCCAAACTC GGCTACAAGC ACAAGCAGCG GACCGTGTTC ATCCAGCGAG TTGAATGAGC ATAATAAGCC TTCTCCACAC AGTTCCCCTA GGAATAATGG CACTGCAGTA CATCGAACTT TGCCAGGCTT AATCAATGAA ATCATGAGCA AAGGCAAGAG GATGGCATAT GAGGAGCTCT GTAACGCAGT CTTGCCGCAC TGGCCTCACT TGAGGAAACA CAACGGAGAA CGATATGCAT ATTCAAGCCA TTCACAGGCT GTTCTTGATT GCCTGAGGAA TAGGCATGAG TGGGCTCGTC TGGTTGATCG TGGCCCCAAG ACTAACTCAG GGAAAAAGAA ACGGAAGCTC GATGCAGCAG AGGAGGACTC AGATGAGAAC GAAAGCAGTA AGGGAGGAAG GAAGAGACTG CATCAACATC ACTCTCAAGG AGAAGAATTT CCCAAAGGAA AAAGGAAAGC AAGAAAACGG AGAAGGCTCT CTCTCCAAAG AAAAGGCATT AAAGTGTTGA GAAAAAAGAG AAACCAAGAA GAAGACGAGG TAAGCGAAGA AGACGAGGAA GGTGCGTTCT CGGACACAAG TGAGGAGAGC ATCTTCTGCG AAGAAGAAGA AGAAGAAGAA GAGGGCCACA CTACTGCTGC TGGTACTGGA CAAGTCTCTG CTAGTAGCTC TGAGGAAGCT CAAGCCACTT CATGA 
Length3225
Protein Sequence
Protein Residue
Map Locationscaffold_1: 14352393.. 14356596
Download Sequence
A.thaliana
AGI-codeAT1G32810.2
DescriptionRING/FYVE/PHD zinc finger superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg489223
2.44949 Ahg470503 Helicase protein with RING/U-box domain
3.16228 Ahg488536 SART-1 family
3.16228 Ahg490965 U2 snRNP auxilliary factor, large subunit, splicing factor
4.3589 Ahg944914
4.69042 Ahg925610 global transcription factor group B1
4.69042 Ahg495615 DNA topoisomerase I alpha
4.79583 Ahg478482 DnaJ domain ;Myb-like DNA-binding domain
5.09902 Ahg929867 pre-mRNA-processing protein 40B
6.9282 Ahg925800 calmodulin 4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression