Detail



ID : Ahg927869

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|927869|scaffold_300326.1
Sequence
AGAGAGAAAA ATAAAGAGAA GTATGGTGGA GGAAACGAGC TCTGGTGGTG GCTCTTCGTC TTCTCCTATC AAAACCGTCG TCGTGTTGGT TCAGGAGAAC AGGTCTTTCG ACCACATGTT AGGTTGGTTT AAGGAACTAA ACCCGGAAAT CGATGGAGTA TCCGAATCCG AACCAAGATC CAACCCAATT TCTACATCTG ACCCGAACTC TGCTCAAGTC TTCTTCGGCA AAGAATCTCA GAACATTGAT CCTGATCCCG GTCACTCTTT TCAGGCGATC TACGAACAAG TGTTCGGAAA ACCATTCAGC GACGAGAGTC CGTACCCGTA TCCGAAAATG AACGGGTTCG TACAAAACGC AGAGGCGATA ACAAAAGGGA TGTCGGAGAA AGTAGTGATG CAAGGGTTTC CGCCGGAGAA ACTTCCGGTA TTCAAGGAAC TAGTTCAAGA ATTCGCCGTC TGCGATCGGT GGTTCTCGTC GTTGCCGTCG TCGACGCAGC CTAACCGACT CTACGTCCAC GCAGCGACAT CAAACGGTGC GTTTAGTAAT GACACTAACA CACTTGTCCG TGGGTTTCCT CAGAGGACAG TCTTCGAATC ACTTGAAGAG AGTGGTTTCA CGTTTGGGAT TTATTACCAA TCTTTTCCTA ATTGCCTCTT TTACAGGAAC ATGAGGAAAT TGAAGTACGT GGACAACTTT CATCAATACC ACTTAAGCTT CAAGAGGCAT TGCAAAGAAG GGAAGCTTCC AAACTATGTT GTCATAGAAC CAAGATACTT CAACATTTTG TCGGCTCCAG CAAATGATGA CCATCCCAAA AACGACGTTG TTGAAGGCCA AAACCTAGTC AAAGAGATCT ACGAAGCCTT AAGAGCTAGT CCTCAGTGGA ACGAGATTCT CTTCGTTGTT GTTTATGATG AACATGGTGG TTACTATGAC CATGTCCCTA CTCCAGTCAC TGGTGTCCCA AATCCTGATG GTCTTGTTGG ACCCGAGCCC TATAACTTTA AGTTTGACCG GCTTGGTGTT AGGGTTCCTG CATTGCTAAT CTCGCCTTGG ATCGAACCTA AAACGGTGTT ACACGAGCCA AACGGACCAG AGCCAACGTC GCAGTTCGAG CATTCATCAA TTCCGGCAAC ACTGAAAAAA ATATTCAACC TCAAGAGCTT TCTTACAAAG CGTGATGAAT GGGCTGGAAC ATTCGATGCT GTCATCAACC GGACCAGCCC AAGGACAGAC TGCCCTGTTA CATTACCGGA ACTTCCAAGG GCAAGAGACA TAGACATTGA AACACAAGAA GAAGACGAAG ATCTCACTGA TTTTCAAATC GAATTGATTC AAGCAGCGGC TGTACTAAAG GGAGATCATA TCAAAGACAT TTACCCGTTT AAGCTCGCGG ATAACATGAA GGTTTTGGAT GCGGCTCGGT ACGTAGAAGA AGCTTTCACT AGATTCCATG GTGAGTCCAA GAAGGCTAAA GAAGGAGGCC GTGATGAGCA TGAGATCGTT GATCTTTCTA AAGGATCTAC TCGTCACTCG ACTCCTAAAT CTTTCGTTCA GAAGTTTTTC TCTTGTTTGA TTTGTGATAA TTGAATTTGA GTTTAACAAA AGATTT 
Length1616
Protein Sequence
Protein Residue
Map Locationscaffold_3: 1012481.. 1015370
Download Sequence
A.thaliana
AGI-codeAT3G03520.1
Descriptionnon-specific phospholipase C3
TAIR curator summaryLysophosphatidic acid phosphatase highly expressed during phosphate starvation and abiotic stresses. Role in lipid synthesis.
Alias[NPC3][non-specific phospholipase C3]
Gene coexpression
MR
MR Locus Description
21 Ahg919779 branched-chain amino acid transaminase 2
27.2397 Ahg344726
32.7261 Ahg946749 Uncharacterised protein family (UPF0497)
37.7359 Ahg919426
42.7434 Ahg902115 Peroxidase superfamily protein
47.6235 Ahg474732
48.7442 Ahg917601 phosphatidylinositol-speciwc phospholipase C5
49.295 Ahg488679
53.6656 Ahg950674 lipid transfer protein 4
66.7832 Ahg496112 myb domain protein 59
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression