Detail



ID : Ahg950674

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950674|scaffold_802561.1
Sequence
CCAAAAAAGA AGCAAACACA ATGGCTTTCG CTTTGAGGTT CTTCACATGC CTTGTTTTGA CTGTGTTCGT CGTTGCATCA GTAGATGCAG CAATCACATG CGGCACAGTG GCGAGTAGCT TGAGTCCGTG TCTAAGCTAC CTATCAAAAG GTGGGGTGGT GCCACCTCCG TGCTGTGCAG GAGTCAAAAA GTTGAACGGT CTGGCTCAAA CCACACCGGA CCGCCAACAA GCATGCCGGT GCTTACAGGC CGCTGCAAAA GGGGTTAATC CAAGTCTAGC CTCTGGCCTT CCTGGAAAGT GTGGTGTTAG CATCCCCTAT CCCATCTCCA CGAGCACTAA CTGCGCAACC ATCAAGTGAA GTGGGGGATT ACGACATGAT TT 
Length382
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17902879.. 17903387
Download Sequence
A.thaliana
AGI-codeAT5G59310.1
Descriptionlipid transfer protein 4
TAIR curator summaryEncodes a member of the lipid transfer protein family. Proteins of this family are generally small (~9 kD), basic, expressed abundantly and contain eight Cys residues. The proteins can bind fatty acids and acylCoA esters and can transfer several different phospholipids. They are localized to the cell wall. The mRNA is present in flowers and siliques, and is strongly up-regulated by abscisic acid. Predicted to be a member of PR-14 pathogenesis-related protein family with the following members: At2g38540/LTP1, At2g38530/LTP2, At5g59320/LTP3, At5g59310/LTP4, At3g51600/LTP5, At3g08770/LTP6, At2g15050/LTP7, At2g18370/LTP8, At2g15325/LTP9, At5g01870/LTP10, At4g33355/LTP11, At3g51590/LTP12, At5g44265/LTP13, At5g62065/LTP14, At4g08530/LTP15.
Alias[LTP4][lipid transfer protein 4]
Gene coexpression
MR
MR Locus Description
1 Ahg496059 lipid transfer protein 3
1.73205 Ahg483270 Remorin family protein
2.23607 Ahg321490 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
5.2915 Ahg480711 histone H1-3
8.48528 Ahg470764 highly ABA-induced PP2C gene 2
11.3137 Ahg492324 Fe superoxide dismutase 1
13.2288 Ahg493143 tonoplast intrinsic protein 2;2
13.4907 Ahg474842 Pectinacetylesterase family protein
14.6969 Ahg473243 inositol transporter 2
17.4356 Ahg927863 cytochrome P450, family 87, subfamily A, polypeptide 9
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression