| Annotation |
|---|
| Description | jgi|Araly1|927898|scaffold_300355.1 |
| Sequence |
TCTCAAAGAA GAAGAAGAAG ATGCTGACGA GTCCCAGTAA CGCACTTCAC AGTAGTACTC CACACTTCTG GCCAGTTCGC CGGAGCAGGC TTTGCCGTTC CCGGAATTTC CCTCGTTTTC ACTCCGGCGA ACGCAGCAGC GGCGGAGGAG GAAAATTGTG CTCGCTCTCT CTTCTCTCCG CAAGTGGCGC CAGTAAATTC AGTGTCAGAG CTCTAGTTAG ACCAGATGTT ACCGAAGACG CTGACTCTGT CGGCGATGGG TCTCTGGCTT TTCCTAACCA CGTTTCTGTC AAAATTCCTT TCGGAAATAG AGAGATTTTA GTAGAGACTG GTCTTATGGG GAGACAAGCA AGCTCTGCTG TAACAGTGAC AGATGGAGAA ACTATTGTCT ACACATCTGT TTGTCTAGCT GATGTTCCGA GTGAGCCATC AGATTTTCTT CCCCTTTATG TTCACTATCA GGAGCGATTC TCAGCTGTTG GTCGAACTAG TGGTGGATTT TTTAAGCGAG AAGGAAGAAC AAAAGATCAC GAGGTTCTGA TTTGTAGGTT GATCGATAGA CCTCTACGCC CCACTATGCC CAAAGGTTTC TACAATGAAA CTCAGATATT ATCCTGGGTT TTGAGCTATG ATGGATTACA CGCACCTGAT GCTTTAGCTG TTACATCTGC TGGAATTGCT GTAGCTCTTT CAGAAGTACC AAATGCGAAA GCGATTGCAG GAGTTCGGGT TGGTCTAATT GGGGGCGAAT TCATCGTCAA TCCAACCGTG AAGGAGATGG AAGAGTCACA GCTAGATTTG TTTCTAGCTG GAACAGATAC AGCCATATTA ACGATAGAGG GATACAGTAA TTTTCTTCCT GAGGAAATGC TGCTCCAAGC TGTTAAAGTT GGACAGGATG CTGTACAGGC TACATGCATC GCTATTGAAG TTTTAGCAAA GAAATATGGA AAGCCCAAAA TGCTTGACGC TATCAGATTA CCACCTCCAG AGCTATACAA GCATGTGAAA GAACTTGCTG GTGAGGAATT GACCAAAGCG CTACAAATTA AGAGCAAAAT ATCGAGAAGG AAAGCCATAT CGTCCCTGGA AGAAAAGGTC TTGACAATAC TGACAGAGAA GGGGTATGTT ATTGATGAGG TTGCATTTGG AACCATAGAA GCACAACCTG ATCTGTTGGA GGATGAAGAC GAGGATGAGG AAGTTGTTCC TGAAGGGGAG GTGGACCAAG GCGATGTACA CATTAGGCCC ATCCCTCGGA AACCTATTCC TTTACTATTT TCTGAAGTAG ATGTCAAGCT GGTCTTCAAA GAAGTATCGT CAAAGCTCCT ACGGAGGCGA ATTGTTGAGG GAGGTAAAAG AAGTGATGGT CGGACTCTGG ATGAGATTCG TCCAATTAAT TCAAGATGTG GACTGCTTCC AAGGGCACAT GGAAGTACTC TGTTCACACG TGGTGAAACA CAGGCACTGG CAGTTGTTAC GCTTGGTGAT AAACAAATGG CACAGAGAAT TGACAACCTT GAGGGTTCTG ATGAATACAA GAGGTTCTAT CTTCAGTACA CTTTTCCTCC ATCGTCTGTT GGTGAAGTTG GACGAATTGG TGCACCCAGT AGAAGAGAAA TAGGTCATGG GACACTAGCA GAGCGAGCAT TGGAGACCAT TCTACCTAGT GATGATGACT TTCCTTACAC AATACGTGTT GAAAGTACAG TAATTGAAAG CAATGGTTCT TCAAGCATGG CATCTGTTTG CGGCGGTTGC TTGGCTTTGC AAGATGCCGG AGTTCCAGTC AAGTGTTCTG TTGCTGGCAT AGCAATGGGA ATGGTTTGGG ATACTGAAGA ATTTGGCGGT GATGGATCTC CCCTTATCCT TTCTGACATC ACTGGAGCTG AAGATGCATC TGGTGATATG GACTTTAAGG TTGCTGGGAA TGAAGATGGT GTTACCGCCT TTCAGATGGA CATTAAGGTA GGAGGAATCA CTTTAGAGAT AATGGAAAAG GCTCTGATAC AGGCGAAAGC TGGGCGTCGC CATATTCTTG CTGAAATGGC AAAGTGCTCA CCGCCTCCTA CATTAAGCCT CTCAAAATAC GCTCCATTGA TACATATTAT GAAGGTTCAT CCAAGCAAAG TGTACTCTCT TATTGGTTCT GGTGGTAAGA AAGTAAAGAG CATCATTGAA GAATCTGGAG TTGAGGCCAT TGATATGCAA GATGATGGAA CTGTCAAAAT TATGGCAATC GATGTAGCGA GTCTGGAAAG GGCGAAAGCG ATTATTAGTG GATTGACAAT GGTTCCCGCT GTTGGTGATA TCTACAGGAA TTGTGAAATC AAGTCAATGG CTCCATATGG TGCCTTTGTA GAGATTGCGC CTGGGCGTGA AGGTCTTTGC CATATCAGTG AGCTGAGTGC TGAATGGCTT GCAAAACCAG AGGATGCCTA TAAAGTAGGA GACCGCATTG ACGTCAAACT AATAGAGGTG AATGAAAAGG GTCAGCTTCG ACTTAGTGTA CGGGCTTTAC TTCCCGAATC AGAGACAGAC AAAGACAGTC AGAAACAACA GCCGGCAGGT GATTCTACCA AAGACAAGGG TTCGCAAAGG AAATATGTAA ATACTTCGTC AAAGGACCGT GCAGCAGCAG GAGCATCAAA GGTTTCATCT GGGGATGAAC TTGTCCTGAA GAAGAAAGAT GTAAGGAGAG CAACTGGTGG TAGTAGTGAC AAGACAATGA AAAGCAATAG CAGTACCAAC GAAGAAAGTT TAGTCAACGG TGAAGCTACA ATCAGCTAGT GAATGCAAAC AAGATCACT |
| Length | 2809 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 1118531.. 1124147 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G03710.1 |
| Description | polyribonucleotide nucleotidyltransferase, putative |
| TAIR curator summary | Encodes a chloroplast polynucleotide phosphorylase (PNPase). Involved in response to phosphorus (P) starvation. Mutants impaired in the expression of this gene have been selected through their resistance to fosmidomycin, a strong inhibitor of DXR, an enzyme of the methylerythritol-dependent IPP biosynthesis pathway. The pathway enzymes were upregulated in the mutant seedlings. |
| Alias | [PDE326][PNP][RIF10][PIGMENT DEFECTIVE 326][POLYNUCLEOTIDE PHOSPHORYLASE][resistant to inhibition with FSM 10] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.24264 |
Ahg471164 | RNI-like superfamily protein |
| 4.69042 |
Ahg483474 | |
| 6.48074 |
Ahg487264 | pentatricopeptide (PPR) repeat-containing protein |
| 6.7082 |
Ahg903252 | FtsH extracellular protease family |
| 10.583 |
Ahg483374 | Peroxisomal membrane 22 kDa (Mpv17/PMP22) family protein |
| 10.6771 |
Ahg320374 | YebC-related |
| 10.9545 |
Ahg951055 | H(+)-ATPase 11 |
| 12.2474 |
Ahg494806 | serine carboxypeptidase-like 42 |
| 14.7986 |
Ahg927788 | Tho complex subunit 7/Mft1p |
| 16.2173 |
Ahg326886 | DEAD box RNA helicase (RH3) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|