| Annotation |
|---|
| Description | jgi|Araly1|326886|fgenesh1_pm.C_scaffold_6002106 |
| Sequence |
ATGGCGTCGA CGGTAGGAGT TCCATCACTT TACCAAGTTC CTCACCTTGA AATCTCCAAA CCCAATTCCA AAAAGAGGTC TAATTGCTTC TCTTTATCTC TCGATAAGCC TTTCTTCACT CCTCCTATCT CTCTTGCTCG TAGAACTCGT CTTATCCATT CCTCTTCTCT TCTTGTTCCT TCTGCTGTTG CTACCCCTAA TTCTGTTCTT AGTGAAGAAG CTTTCAAAAG TCTTGGTCTT TCTGACCATG ACGAGTATGA CCTTGACGGT GACAACAACG TTGAAGCTGA TGATGGTGAA GAGCTTGCTA TCTCTAAACT TAGTTTGCCT CAGCGTCTTG AAGAGTCTCT TGAGAAGCGT GGTATTACTC ATCTCTTCCC CATTCAGAGA GCTGTGTTGG TACCTGCACT GCAAGGAAGA GATATTATAG CTCGTGCAAA GACAGGAACT GGAAAGACTT TAGCTTTTGG TATCCCTATC ATTAAACGTC TCACTGAAGA AGCTGGAGAC TACACTGCTT TCAGGAGGTC TGGTCGTCTT CCTAAGTTCC TTGTTCTTGC GCCGACTCGA GAGCTGGCTA AGCAAGTGGA GAAGGAGATT AAGGAGTCTG CACCTTATTT GAGTACCGTT TGTGTGTATG GTGGGGTTTC TTACACCATT CAGCAGAGTG CTTTGACTCG TGGTGTTGAT GTTGTTGTTG GAACTCCTGG GAGGATCATT GATTTGATTG AAGGAAGGAG TCTTAAATTG GGAGAAGTCG AGTATTTGGT ACTTGATGAA GCTGATCAGA TGCTTGCTGT TGGTTTTGAG GAGGCCGTGG AATCGATTCT TGAGAATCTC CCAACTAAGC GACAAAGTAT GCTTTTCTCA GCTACTATGC CTACTTGGGT TAAGAAGTTG GCGAGGAAGT ACCTTGACAA TCCCTTGAAC ATTGATCTGG TTGGAGACCA AGATGAGAAG CTAGCAGAGG GGATCAAACT TTATGCAATC GCAACCACAT CAACATCAAA ACGCACTATT CTAAGCGACC TTATAACAGT GTATGCGAAG GGTGGCAAGA CCATTGTTTT TACTCAAACT AAAAGAGATG CAGACGAAGT TTCTCTTGCA TTGTCAAACA GTATAGCTAC CGAAGCACTT CATGGAGATA TATCCCAGCA TCAAAGAGAG AGAACACTCA ATGCTTTCCG CCAAGGGAAA TTCACTGTAT TAGTTGCCAC TGATGTTGCA TCTCGTGGAC TTGACATCCC AAACGTAGAT CTAGTTATCC ACTATGAACT TCCTAATGAC CCAGAGACTT TTGTGCACCG TTCTGGTCGT ACTGGGCGTG CAGGGAAAGA AGGCTCTGCC ATTCTCATGC ACACCAGCAG CCAAAAGAGA ACAGTGAGGT CTCTGGAGCG TGACGTAGGC TGCCATTTTG AATTCATTAG CCCACCAACT GTTGGAGACT TGTTGGAATC GTCAGCAGAC CAAGTGGTGG CCACTCTAAA TGCTGTCCAC CCTGACTCGA TAAAGTTTTT CTCAGCAACT GCTCAAAAAC TATATGAGGA AAAAGGAACA GATGCTTTAG CTGCAGCTCT AGCTCACCTG AGCGGTTTCT CTCAGCCGCC TTCATCAAGA TCTCTCCTCA GCCATGAGAA GGGATGGGTG ACTTTGCAAT TGATCCGAGA TCCAACAAAC GCTAGAGGCT TTCTGTCTGC GAGGTCTGTT ACTGGTTTTC TTTCCGATGT TTACCGTACA GCTGCAGATG AAGTTGGAAA AATCTTCTTG ATCGCAGATG ACAGGGTCCA AGGAGCTGTT TTTGATCTAC CAGAGGAAAT CGCGAAAGAG CTCCTAGAGA AAGAAGTGCC AGAAGGAAAC AGTTTATCCA TGATAACCAA GTTACCTCCA CTGCAAGATG ATGGACCGTC TAGTGATAAC TATGGACGGT TCTCTAGCAG AGACAGGATG CCTAGAGGAG GAGGAGGTTC TAGAGGGTCA AGAGGCGGTA GAGGAGGATC ATCACGAGGC CGTGATAGTT GGGGAGGTGA TGATGACAGA GGAAGTAGAA GGAGCAGTGG CGGAGGAAGC AGCTGGTCCC GTGGTGGTAG TAGTTCCAGA GGAAGTTCTG ATGATTGGTT GATCGGTGGC AGAAGTTCAT CAAGCAGCAG AGCTCCTTCG CGAGAGAGAA GTTTTGGAGG TTCTTGCTTC ATTTGTGGGA AATCAGGACA CAGGGCAACA GATTGTCCTG ACAAGAGAGG ATTTTAG |
| Length | 2247 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 11330165.. 11333526 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G26742.2 |
| Description | DEAD box RNA helicase (RH3) |
| TAIR curator summary | |
| Alias | [AtRH3][emb1138][RH3][embryo defective 1138] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.44949 |
Ahg348440 | chloroplast RNA-binding protein 29 |
| 4.89898 |
Ahg486312 | ketol-acid reductoisomerase |
| 5.19615 |
Ahg889110 | heavy metal atpase 3 |
| 5.38516 |
Ahg490998 | Methylthiotransferase |
| 5.83095 |
Ahg494966 | tRNA synthetase class I (I, L, M and V) family protein |
| 6.63325 |
Ahg943476 | translocon at the outer envelope membrane of chloroplasts 159 |
| 7.28011 |
Ahg471751 | TLC ATP/ADP transporter |
| 7.68115 |
Ahg482988 | Radical SAM superfamily protein |
| 8.544 |
Ahg470715 | translocon at the inner envelope membrane of chloroplasts 110 |
| 8.83176 |
Ahg942027 | Protein of unknown function (DUF3411) |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|