Detail


ID : Ahg928998

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|928998|scaffold_301455.1
Sequence
AACACAAATA TCTTAAACTC ATGTCTGAAT GTGGCTACTT TTCAGCAACA ACTATGTTGA GAATTTGTGT AGTCTTAATA ATATGTTTAC ATATGTGTTG TGCCTCGAGT GATTGTACAA GCCACGATGA TCCTGTGTCT CAAGAGGAAG CAGAGAAAGC GACAAAGCTG AAGCTTGGTT CGATCGCTTT ACTTCTTGTG GCCGGAGGTG TCGGCGTGAG TCTACCGTTG ATCGGGAAAA GGATTCCGGC GTTACAACCG GAAAACAATA TCTTCTTCAT GGTGAAAGCT TTTGCTGCAG GAGTGATCCT CTGCACAGGT TTCGTTCATA TCTTACCAGA CGCGTTCCAG AGATTGAGCT CTCCATGTCT CCAGGACACT ACAGCTGGAA AGTTCCCGTT TGCGGGTTTC GTAGCGATGC TGTCGGCGAT GGGGACTCTT ATGATCGACA CATTCGCGAC AGGGTATTAC AAGAGGCAAC ATTTTAACAG TAACAGTGGG AGCAAGCAAG TGAACGTAGT CGTAGACGAA GAAGAGCATG CGGGCCATGT TCACGTTCAC ACGCACGCGA GTCACGGACA CACACATGGC TCGACCGAGT TGATCAGAAG ACGCATAGTG TCGCAGGTGC TTGAGATTGG GATAGTTGTG CATTCGGTTA TAATAGGGAT ATCACTTGGA GCTTCACAGA GCATAGACAC CATAAAGCCA CTCATGGCTG CTCTCTCTTT CCATCAGTTC TTTGAAGGTC TTGGCCTCGG TGGATGCATC TCCATGGCGG AGATGAAGTC GAAATCAACA GTGATAATGG CGACATTTTT CTCGGTAACA GCGCCACTTG GGATAGGAAT AGGGTTGGGG ATGTCGAGTG GTTTAGGGTA CAGGAAAGAG AGCAAAGAGG CAATTATGGT GGAAGGAATG CTGAATGCTG CATCTGCTGG GATACTCATT TACATGTCAC TTGTTGATCT TCTTGCTCCT GATTTTATGA ATCCAAGATT GCAATCCAAT CTCTGGCTTC ACTTGGCCGC TTATCTCTCT CTCGTCCTAG GCTCTGCTTC CATGTCTCTC CTTGCCATCT GGGCCTGATT CTTGAGCTGC AACTAACA
Length1108
Protein Sequence
Protein Residue
Map Locationscaffold_3: 4823394.. 4824693
Download Sequence
A.thaliana
AGI-codeAT3G12750.1
Descriptionzinc transporter 1 precursor
TAIR curator summaryA member of Zrt- and Irt-related protein (ZIP) family. transcript is induced in response to zinc deficiency in the root.
Alias[AtZIP1][ZIP1][zinc transporter 1 precursor]
Gene coexpression
MR
MR Locus Description
12.49 Ahg474732
14 Ahg493510 Rapid alkalinization factor (RALF) family protein
15.8745 Ahg903224 Homeodomain-like superfamily protein
16.7033 Ahg915595 Disease resistance protein (TIR-NBS-LRR class) family
17.3205 Ahg477109 Homeodomain-like superfamily protein
17.7482 Ahg895882 TRAF-like family protein
18.735 Ahg490488 TRAF-like family protein
18.8944 Ahg492401 phosphoglucan, water dikinase
20.1742 Ahg470268 glutathione S-transferase F4
24.8193 Ahg928996 Homeodomain-like superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression