| Annotation |
|---|
| Description | jgi|Araly1|477109|fgenesh2_kg.2__2239__AT1G79430.2 |
| Sequence |
TTGCATCACA TTCGTTTCTT GAATTCCCTC TTTCAGAGAG AGTGAGAGAG AGATAGAGAG AGAGAGGGAG AATGTTCCAT GCTAAGAAAC CTTCAAGTAT GAATGGTTCA TATGAGAACA GAGCTATGTG CGTTCAAGGC GATTCAGGCC TCGTCCTCAC CACCGACCCT AAACCGCGTT TGCGTTGGAC CGTCGAACTC CACGAGCGTT TTGTGGACGC CGTCGCTCAG CTCGGCGGCC CCGACAAAGC GACCCCAAAG ACGATTATGA GAGTTATGGG TGTGAAGGGT CTTACTCTTT ACCACCTAAA GAGCCATCTT CAGAAATTCA GGCTTGGAAA GCAGCCGCAC AAGGAGTACG GAGATCACTC CACAAAGGAA GGTTCAAGAG CTTCTGCCAT GGATATTCAG CGCAACGTAG CTTCTTCTTC TGGCATGATG AGTCGCAACA TGAATGAGAT GCAAATGGAA GTGCAGAGAA GATTGCACGA ACAGCTAGAG GTGCAGAGAC ATCTGCAACT GAGGATTGAA GCACAAGGAA AGTACATGCA ATCTATATTG GAGAGAGCTT GCCAAACCCT AGCCGGTGAG AACATGGCAG CCGCCACCGC AGCAGCCGCC GTCGGAGGAG GATACAAGGG TAATTTGGGA AGTTCGAGTC TTTCAGGAGC GGTGGGCCCA CCTCCTCATC CTCTTAGTTT CCCGCCGTTT CAAGATCTAA ACATCTATGG AAACACAACC GACCAAGTCC TCGACCATCA CAACTTCCAT CATCAAAACA TAGAGAACCA TTTCACGGCC AACAATGCTG CAGACACCAA CATTTACTTG GGGAAGAAGC GACCTAATCC TAATTTTGGT AACGATTTAA GGAAAGGACT ATTGATGTGG TCAGATCAAG ATCACGATCT TGCCGCAAAC CAATCGATCG ATGATGAGCA TCGAATTCAG ATACAGATGG CCACACATGT CTCCACGGAT TTGGATTCTT TGTCGGAGAT CTACGAAAGG AAATCAGGTC TATCAGGTGA TGAAGGGAAT AATGGTGGGA AATTACTAGA AAGGCCATCG CCTCGGAGAT CACCATTAAG TCCTATGATG AACCCTAATG GTGGATTAAT ACAAGGAAGA AACTCGCCAT TTGGGTGATC CAATAATTAA TTTTTATGAG TGATGCATGG TAACGTAAGA ACGAGATATA TATGTTTTGT CATTGTGAGT TTGACGTAGG TTTTAGAGAT GAGACAAAAC AAAACAAAAT ATAAACTTTG TTATGTTATC GGATTAGTTT TGCTCGTGTT TTAATCTGTA CGGAAACTAT ATTATTGCTG TTCTTATAAT ATTTAGGATC TATATATTTA GTACTTATTC GTTACTTATT TCGTCTAGTG AATTGTTTGA TGATTGATCT T |
| Length | 1411 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_2: 17597639.. 17599615 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT1G79430.2 |
| Description | Homeodomain-like superfamily protein |
| TAIR curator summary | Encodes gene product that is required for several aspects of phloem development in the root: (1) the specific divisions organizing the phloem pole, (2) sieve element differentiation and (3) the expression of a companion-specific gene. Mutant has a defect in the organization of phloem poles in the root. apl seedlings have a short, determinate root with only occasional lateral branches. |
| Alias | [APL][WDY][ALTERED PHLOEM DEVELOPMENT][WOODY] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 9.32738 |
Ahg492401 | phosphoglucan, water dikinase |
| 10.198 |
Ahg934404 | conserved peptide upstream open reading frame 52 |
| 13.5277 |
Ahg480557 | ubiquitin-conjugating enzyme 29 |
| 17.3205 |
Ahg928998 | zinc transporter 1 precursor |
| 22.4499 |
Ahg490488 | TRAF-like family protein |
| 26.4953 |
Ahg928996 | Homeodomain-like superfamily protein |
| 27.2029 |
Ahg895882 | TRAF-like family protein |
| 30.5941 |
Ahg940129 | C2 calcium/lipid-binding plant phosphoribosyltransferase family protein |
| 30.8869 |
Ahg939405 | isopentenyltransferase 3 |
| 35.7771 |
Ahg929332 | metallothionein 3 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|