Detail



ID : Ahg929131

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929131|scaffold_301588.1
Sequence
ACCAAAACCT AGTTCGTCAA ATGTTTAACT TGATGAGACT AATTCATCGA TCCTTCTCGT CGTCTCCTAA CTCTGTTCTT CAAACCTTCC GTCCAATCTC TCAACTATGT TCCAACGGTC GTCTTCAAGA AGCTTTACTA GAGATGGTGA TGTTAGGTCC GGAGATTGGG TTCCATTGTT ACGATGCTTT GTTGAATGCG TGTTTAGACA AAAGGGCTCT TAGAGAAGGT CAGAGAGTTC ATGCCCACAT GATCAAAACC CGTTATCTTC CAGCTACTTA TCTTCGAACT CGTCTGCTTG TCTTCTATGG TAAATGTGAT TGTTTGGAGG ATGCACAGAA AGTGCTCGAC GAAATGCCTG AGAAGAATGT CGTTTCCTGG ACTGCTATGA TCTCGCGTTA TTCTCAAACT GGGCATTCTT CTGAGGCTCT CTCTGTTTTT GCAGAGATGA TGAGATCAGA TGGGAAACCA AATGAGTTCA CTTTCGCTAC TGTTCTTACT TCTTGTATAC GTGCTTCTGG ATTAGCTCTT GGTAAACAAA TCCATGGACT CATAGTTAAG TGGAATTACG ATTCTCACAT TTTTGTTGGG AGCTCTCTTC TTGACATGTA TGCCAAAGCT GGTCAAATTG AAGAAGCTCG CGAGATTTTC GAGTGCTTGC CTGAGAGAGA TGTTGTTTCA TGTACTGCTA TTATTGCTGG ATATGCCCAG TTAGGTCTTG ATGAAGAAGC ATTAGAGATG TTTCAGAGAC TGCAGAGTGA AGGAATGCGT CCCAATTATG TTACCTACGC TAGTCTTTTA ACAGCATTAT CTGGACTTGC TTTGTTAGAT CATGGCAAGC AAGCTCATTG CCATGTCTTG AGACGTGAAC TTCCGTTCTA TGCGGTCCTT CAGAATTCTC TTATTGATAT GTACTCAAAA TGTGGGAATC TCTCTTACGC TCAAAGGCTT TTTGATAACA TGCCTGAAAG GACAGCGATT TCATGGAACG CGATGCTTGT GGGATATAGT AAACATGGTT TAGGAAGAGA AGTTCTTGAG CTGTTCAGAT TGATGAGAGA TGAGAAGAGA GTAAAGCCTG ATGCAGTAAC CCTTTTGGCT GTCTTGTCTG GTTGCAGCCA TGGAAGGATG GAAGACACAG GGCTAAGTAT ATTTGATGGC ATGGTAGCGG GAGAATACGG GATAAAGCCT GACACTGAGC ATTATGGTTG CATCGTTGAT ATGCTTGGCC GTGCGGGTAG GATTGATGAG GCATTTGAAT TCATCAAAAG AATGCCATCT AAACCAACTG CTGGTGTCTT GGGTTCCCTT TTAGGAGCTT GTAGGGTTCA CTTATCTGTA GATATTGGCG AATATGTAGG GCATAGACTC ATTGAGATTG AACCAGAGAA TGCAGGGAAC TACGTCGTTC TCTCTAATTT GTATGCTTCT GCAGGAAGAT GGGAAGATGT AAACAATGTA AGAGCTATGA TGATGCAGAA AGCTGTTACA AAAGAACCAG GAAGAAGCTG GATTCAACAC GAGCAAACCT TGCATTACTT CCACGCCAAT GATCGTACCC ATCCAAGAAG GGAAGAAGTG TTAGCTAAAA TGAAAGAAAT ATCGATAAAA ATGAAGCAAG CTGGTTATGT TCCTGATCTT AGCTGTGTGC TATATGATGT GGATGAAGAG CAGAAGGAGA AGATGCTACT TGGCCACAGT GAGAAACTAG CCTTGACTTT TGGGTTGATT ACTACTGGTG AAGGGATTCC AATTAGAGTT TTCAAGAATC TACGTATATG TGTTGATTGT CATAACTTTG CCAAGATCTT CTCAAAGGTT TTTGAAAGGG AAGTGTCATT AAGGGATAAA AACAGGTTCC ATCAAATTGT CAAAGGAATA TGTTCGTGCG GAGATTACTG GTGAACATAG CAAAAAGGCA TGTA 
Length1924
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5336208.. 5338115
Download Sequence
A.thaliana
AGI-codeAT3G13770.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
11.8322 Ahg935895 Tetratricopeptide repeat (TPR)-like superfamily protein
47.2758 Ahg489822 conserved telomere maintenance component 1
64.3428 Virus1140
77.5371 Ahg888078 Protein of unknown function (DUF3414)
92.0761 Ahg949231 B-box type zinc finger protein with CCT domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression