| Annotation |
|---|
| Description | jgi|Araly1|929172|scaffold_301629.1 |
| Sequence |
TGAAACAGTC TAAGGCTGCA ATGAGTATGC AACCTATTCC TCAGTCGAAA TCTTCATCAA ATGGATTTCC ACTCAAAAGA GGTGAAAGAG AGGAAGTATT AAATAAGGCA AATACATCTA ATACAGCATT CAATGGGGAA GCTGGAAGCT TGGAGAGGCC TTCGCTTGAT CGGTTAGTGT ATCTCTCAAC ATGTTATATC GGGCATCATG TGGAAGTGCA TCTAAGGAAT GGATCAGTGT ATACTGGTAT TTTTCATGCT GCTGATGTAG AGAAGGATTT TGGAATCATT CTAAAGATGG CATGCTTGAT TAAAGATGGT ACTTTACGAG GGCATAAATC CCGTTCCGAA TTTGTCAGAA AGCCGCCTTC CAAGACGTTC ATTATTCCGG CAGATGAACT TGTGCAAGTT ATAGCTAAGG ATCTCTCTGT ATCCTCGACC AACATGTCAA ATGCGGTTCA GGGTGAGAAA CCAGCGGAGC TGTTGACAGA CTCTTCTATA TCACAGTCTT ATCATGTTGA TCGGGAAAGA CAGCTGCAAC CCTGGGTACC TGATGAGACT ATTCCACAGG GTGCAGATTT GGAGAATGTG TTTGATAACC CTTGGAATAG GAAATGGAAT CAGTTTGAGG TGAATGAGTC ACTGTTTGGA GTAAAGAGTA CTTTCGACGA GGAAATCTAT ACCACAAGAC TTGAGAGAGG CCCTCAGACT AAACAGTTGG AAGAGCAAGC CCGGAAGATT GCGAGAGAGA TCGAGGCTGA GACTACCCGA GATCTTCATG TAGCAGAGGA AAGAGGCCTT CAGCTTAATG AGAACTTTGA TTTTGACGAG GAAGCCAGAT ACTCATCGGT CCGTCCAGTT ACTGGATTTG GTGATAGTGG GTTTGATGAG GAGGACAACG CATTGCTGGA TACTTGCAAC GATCTGACTT TTGGTGGTTC ATCTACTTCT GATGGCCAGA AGCCAGCTTC TAGTGGCAAG GGTTGTGAAG AATTACGGGG TGGCAGTCAG TCTTCTCGGA ATAATACAAA TGTAGATCAA AGCTGCTCGA CCTCTAAACA ACAATCCAAA TATTTTCCTG CCGCAGGCAG CAATATCAGT GAGAGCCAGC TAGATGAGCG AAGAAGAAAC AATAACCAAG AGTCACACAA TAACAGATCA GCTGAGGAAT CAACTTCTGG TCATGGAGAT ATCAAAGAAG GTGCAAAATT TGGTGGTGGT GCAACTTCGG TGTCGAAGGC TGTTACTGAG AGAGAAAGAG AAGCCAGTCA AATTTCTAGT AAAACAAAAT CTGAAAGCTC TTTTGGGCAG TCGGCTTCTA GAAGTTCAGA AAGTCGCCCA GGTCCTTCAA CATCAACTCG TCCTGGGTTA TCACCGAGCT CGTCAATTGG TTCTATGACC TCATCAGAAA AGTCCACACT TAATCCGAAT GCAAAGGAAT TCAAACTCAA TCCAAACGCG AAGAGTTTCA AACCATTGCA ACCAGCTGTT GTGCGACCTC AATCTCCAGT TTCAGATGCC TCATTCTACT ACCCTGGTCC TAGTCATGTT CCTCCTGTTC AGCAGATGCC TGGAATGCCG CCTGTTAATT ACGGAGTCCC GCCATATCCT GGCAACCAAC CACCGATGAT GTATCATCCT CAAGCCTATT ATCATCCGAA TGGACAACCT CAGTATCCGC AGCAGCAAAT GATGCCTGGT CAGCAGCAGC AAATGATGCC TGGCCAGCAG CAGCCTAGGC CAGTTTATTA CATGCAGCAT CCTCCTCCTC CTTACCCGCA GGACATGCCA TATCATAATA AAGGACGAGA GTAATTACTA CTACCCGATG GTGAT |
| Length | 1835 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_3: 5487246.. 5490858 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT3G14010.1 |
| Description | CTC-interacting domain 4 |
| TAIR curator summary | hydroxyproline-rich glycoprotein family protein, similar to Mrs16p (GI:2737884) (Saccharomyces cerevisiae); weak similarity to ataxin-2 related protein (GI:1679686) (Homo sapiens). Included in a family of CTC interacting domain proteins found to interact with PAB2. |
| Alias | [CID4][CTC-interacting domain 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.89898 |
Ahg922444 | D111/G-patch domain-containing protein |
| 6 |
Ahg491024 | phosphotransferases, alcohol group as acceptor;binding;inositol or phosphatidylinositol kinases |
| 6.40312 |
Ahg496189 | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| 10.4881 |
Ahg949816 | dentin sialophosphoprotein-related |
| 10.7238 |
Ahg923648 | ZIM-LIKE 2 |
| 13.6015 |
Ahg487936 | TRS120 |
| 13.8564 |
Ahg488386 | U-box domain-containing protein |
| 14.7986 |
Ahg493136 | Tryptophan RNA-binding attenuator protein-like |
| 15.8745 |
Ahg918994 | Transcription factor TFIIE, alpha subunit |
| 17.3205 |
Ahg317971 | ubiquitin-specific protease 13 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|