| Annotation |
|---|
| Description | jgi|Araly1|496189|fgenesh2_kg.8__2005__AT5G60410.5 |
| Sequence |
AAAATCTTAT CAAAGCTGTG AAAACCCTAG TTTCCAATCC TCTCATTAAT CTATCAGTTT CCGATTTCAT GATCGGGTGC TGTATATGGA GACTAATTGC TGGAGTTTAG GTTCGTGTGT TTTGAACTGA GCTTTTGGTT CTTGTTTGTC TGCTGTTGAA GACATGGATT TGGAAGCTAC TTGTAAGGAT AAACTTTCAT ATTTTCGAAT AAAAGAGCTC AAGGATGTGC TCACTCAGCT GGGACTTTCG AAACAGGGAA AGAAGCAGGA ACTTGTCGAC CGGATCTTAA CCCTTCTTTC TGATGAACAA GCTGCCAGGG TGTGGTCTAA AAAGAATACA GTGGCAAAGG AAGAAGTTGC AAAATTAGTG GACGATACAT ATAGGAAAAT GCAAGTATCT GGGGCAAGTG ATTTAGCATC AAAAGGACAA GTAAGTTCAG ATACCAGTAA TCTGAAAGTT AAGGGAGAGC CTGAAGATCC CTTTCAACCA GAAATTAAAG TTCGATGTGT TTGTGGGAAT TCACTAGAAA CAGACTCAAT GATACAGTGT GAGGATCCAA GATGCCATGT TTGGCAGCAT GTTGGCTGTG TTATTCTCCC AGATAAGCCA ATGGATGGGA ATCCACCACT TCCAGAATCA TTTTATTGTG AAATCTGCCG ACTTACTCGA GCTGACCCGT TTTGGGTTAC AGTGGCACAT CCACTCTCTC CAGTGAGGCT GACTGCGACG ACTATCCCAA ATGATGGTAC AAACACAATG CTGAGTGTGG AGAGAACATT TCAAATTACA AGGGCAGACA AGGACCTGCT GGCCAAACAA GAGTACGATG TTCAGGCTTG GTGTATGCTC TTGAATGACA AAGTTCTCTT TAGGATGCAG TGGCCTCAGT ATGCTGATCT GCAGGTCAAT GGTTTGCCTG TACGTGCAAT TAATCGACCT GGATCACAGC TTTTGGGAGT CAACGGCCGC GACGATGGAC CTATTATCAC ACCTTGTATT AGGGATGGAG TTAACAGAAT ATCCTTGAGT GGAGGTGACG TTCGGATTTT TTGTTTTGGA GTTAGACTTG TGAAGCGCAG GACTCTACAA CAGGTTCTAA ATTTGATTCC AGAAGAAGGT AAAGGGGAGA CTTTTGAAGA TGCTCTTGCA CGAGTCCGCC GATGCATTGG AGGTGGAGGT GGAGATGATA ATGCCGACAG TGATAGTGAC ATTGAAGTTG TTGCTGATTT CTTCGGTGTC AATCTTCGGT GTCCTATGAG CGGTTCTAGG ATAAAAGTTG CTGGGAGATT TTTACCCTGT GTGCACATGG GCTGTTTTGA CCTTGATGTG TTTGTGGAGT TGAATCAACG TTCCAGAAAG TGGCAGTGCC CTATTTGTCT GAAGAACTAC TCAGTGGAGC ATGTAATTGT CGATCCTTAT TTTAACCGTA TCACGTCTAA GATGAAGCAT TGTGATGAAG AGGTGACTGA AATTGAAGTG AAACCTGATG GTTCTTGGCG TGTAAAGTCC AAAAGAGAGA GTGAGCGAAG GGAACTGGGG GAACTCTCAC AGTGGCACGC ACCAGATGGT AGTCTTTACC CCTCTGCTGT TGATATTAAA CGGAAGATGG AAATGTTACC GGTTAAGCAA GAAGGTTTCT CAGATGGCCC GGCGCCTCTA AAACTTGGAA TAAGGAAAAA TCGTAATGGC ATTTGGGAAG TTAGCAAACC TAATACAAAT GGATTATCTT CCAATAATAG GCAAGAAAAG GTTGGGTATC AGGAGAAAAA TGTTATACCA ATGAGTAGTA GTGCTACTGG AAGTGGTAGG GATGGTGATG ATGCAAGCGT AAACCAGGAT GCTATTGGAA CTTTTGACTT TGTAGCCAAC GGCATGGAAC TTGATTCCAT TTCCATGAAT GTTGATTCAG GTTATAACTT TCCTGACAGA AACCAATCTG GAGAGGGTGG AAATAATGAT GTCATCGTTC TGAGTGATTC TGATGACGAG AATGATGTAG TAATCACTCC AGGGCCTGCA TACAGTGGTT GTCAAACAGA TGGTGGGCTT ACTTTTCCAC TGAACCCTTC TGGAATAATT AACTCATATA ATGAGGACCC ACACAACATA GCTGGGGGAA GTTCACGCTT AGGTCTTTTC AATGATGATG ACGAATTTGA TACGCCCCTT TGGTCATTTC CTTCTGAAAC TCCAGAAGCC CCTGGGTTCC AGCTATTTAG ATCTGATGCT GACGTTTCAG AAGGTTTAGT TGGTTTGCAT AATCATGGTC CACTAAACTG TGCTCCTGAA ATAAATGGAG GTTACACCAT GGCTCCTGAG ACATCAATGG CATCTATTCC TGTGGTTCCT GGCTCGGCTG GACGATCTGA AGCAAACGAT GGCCTAGTTG ACAATCCTCT TGCATTTGGT AGAGACGATC CCTCACTTCA AATATTTTTG CCAACAAAAC CAGATGCTTC AGCTCAGTCG GGTTTTAAAA ACCAAGCTGA TATGTCAAAT GGTATCCGCA GTGAAGACTG GATCTCGCTT AGGCTAGGTG ATAGCGCTTC TGGGAATCAT CGAGTTCCTG CAACTGCAAA CGGGGTTAAC TCAAGCCAGC AGATGTCTCC AAGGGAAGGT TCTTTGGATA CTACAACAGA CACTGCGTCG TTGCTTCTGG GTATGAATGA CAGTAGGCAA GACAAGGCAA AGAAGCAAAG ATCAGATAAT CCATTTTCAT TTCCTCGGCA GAAGCGTTCT GTAAGACCTC GGATGTTCCT CTCCATTGAC TCGGATTCTG AAACAATGAA CGGGATCATC AGACAAGACA CCGGAGGTTA CCAAGATTTG CTTGATTCTC TCTGTGCAGG CAAGAATTGA ACCGGATGTA GTTTGGCAAA AGCAATGCAC TGGCTGATTT AGTTACTCTG ATAGGCAGGA AAAGTGGGCA CAGTGGGTTC CGGTTTAATT AATTAGTAAT TTGTATACTC GAATAGGTTT TTTTTTTGTG GACGATGATA AAATTACTTC GAAGCCAGGA GGAGCTATAG AGAGATATAG CAATGTAAAT TATGGGCTCC AATTTTTATT TATTTATTAT AAAAA |
| Length | 3085 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 18329635.. 18335949 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G60410.2 |
| Description | DNA-binding protein with MIZ/SP-RING zinc finger, PHD-finger and SAP domain |
| TAIR curator summary | Encodes a plant small ubiquitin-like modifier (SUMO) E3 ligase that is a focal controller of Pi starvation-dependent responses. Also required for SA and PAD4-mediated R gene signalling, which in turn confers innate immunity in Arabidopsis. Also involved in the regulation of plant growth, drought responses and freezing tolerance. This latter effect is most likely due to SIZ1 dependent ABI5 sumoylation. Regulates leaf cell division and expansion through salicylic acid accumulation. signaling |
| Alias | [ATSIZ1][SIZ1] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2.23607 |
Ahg474047 | stomatal cytokinesis defective / SCD1 protein (SCD1) |
| 3.31662 |
Ahg478986 | Regulator of chromosome condensation (RCC1) family protein |
| 3.74166 |
Ahg471561 | VH1-interacting kinase |
| 4 |
Ahg491213 | GTP binding protein beta 1 |
| 4.24264 |
Ahg328336 | RING/U-box superfamily protein |
| 4.58258 |
Ahg329104 | dentin sialophosphoprotein-related |
| 6.40312 |
Ahg929172 | CTC-interacting domain 4 |
| 8.12404 |
Ahg473945 | calcium-dependent lipid-binding family protein |
| 8.94427 |
Ahg939897 | aminophospholipid ATPase 1 |
| 8.94427 |
Ahg902795 | WD40/YVTN repeat-like-containing domain;Bromodomain |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|