Detail



ID : Ahg929180

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929180|scaffold_301637.1
Sequence
TTGTTTGTTC AAATAAGGTT TGAAAAATGA GCGCGGTGAG TTTTCTTTAC AGCTCGAAAA ACCCCAAATT TCGAGGGGCT TTCAATGGGA TTTGTGCTCT GGTTCTGTTT TGCTTCTTCT TTGATCGGAG CGATATTCTC AGGAACCCTT TGTTTAGGAA CTCATCTCTC GTCAATGGTG GTAGTGGCTC AACCTCCCGA GGTAAATTCA ATAATGGTTT CACGTTAATT CGTAGAAATG TGAGGCAAAT TGAAACGAAT GATTCTGGCA ATAGCAGCTT GAGTAGCACT AGTACTGTTT TATTCTCAGG GTTACACAAA CACATTGGTT ATGCTGATCA ATGCGACTTC TTAAAAGCAA ATCCAATTTG TTCCCCTGAT GGATTCTTTG ATTACCTCAA CTTCTTCTAC TGCTCCTGCA GAGATTTCAG TATCTTGGGT TACATGATGT TGGGTGTTTG GCTTGTTGCA TTGTTTTATC TGTTGGGTAA TACTGCTGCT GATTACTTTT GTTGTTCATT GGAGAAGCTT TCAAAGCTTT TGAGGCTACC TCCAACTGTT GCTGGTGTTA CTTTACTTCC TCTTGGGAAT GGAGCACCAG ATGTGTTTGC TAGTATAGCT GCTTTTGTTG GAACAGATAA AGGAGAAGTT GGTCTTAACA GCGTCTTGGG TGGTGCTGTG TTTGTTACTT CTGTTGTTGT TGGCATTGTT TCCCTTTGTG TTGCGGATAA GGATGTCAAG ATCGATAAGA AATGCTTCAT CAGAGACTTG AGTTTCTTCC TTTTCACGCT CGTGTCTTTG TTGGTGATTT TGATGGTTGG TAAAGTGACA GTACGGATTG CCATCGCCTT TGTCTCGATA TATGTGATTT ATGCTTTCCT TGTGGCAGCG AATGTCATTC TGAGAAAACA TGCTAAGAGG TTTAAACTAG AGGCTCTTAC TCCTTTGCTA CCTATGCAAG AAAGCGTGTT TTCCCCGAGT GTTGGAGAGG ATATGCCAAT GAATACCCCC TTGATAGAAA CTGACCCTGA GGATGGTCCA CCTCGGCTAC AGAGTCTTCC TCAGTGGATG TGGGCGTCAA ATGTGGCCAT CTATTCCAAC CATTTCGCGA AAGTTAGTGT ACATGATGAA GACAGGCCAC CTTGGGGATG GATTGATGAC AGTGCAGAAG TTGAGAGCTC CTCATGTACT AAATTCACTT CCTTGTTGGA AATTCCGCTG ACGATTCCAA GGAGGTTAAC AATTCCATCG GTCGAGGAAG ATACATGGTC AAAGACATAT GCTGTGGCCA GCGTTACATT AGCTCCTGTC CTTTTGGCGT CTCTCTGGAG TAGCCAAGAC GATGTGAGTC CCCAAGCTTG TGGTGTCGCA TACTTTATTG GTGTTGCTAT AGGCTCTACT CTTGGTTTTC TTGCTTACAA AAACACAGAA CCCGATCACC CACCTCGAAG ATTCTTGATC CCTTGGGTCC TTGGTGGGTT TATCATGAGC ATCGTATGGT TCTACATGAT TGCAAACGAA CTTGTAGCTC TTCTGGTGAC ATTTGGTGAG ATTTACGGAA TTAACCCGTC GATACTTGCG CTAACAGTAC TTGCTTGGGG AAACTCAATG GGTGACTTAG TGTCGAATAT CGCATTGACG ATGAACGGTG GAGATGGTGT ACAAATCGCC CTATCTGGAT GCTATGCAGG TCCAATGTTC AACACACTCG TCGGGCTCGG TATGTCAATG CTTTTTGGCG CATGGTCCAA GAGTCCTGAC ACATACATGC TACCAGAAGA CAAAAGCCTG TTCTACACAC TTGGGTTTCT AGTAGTCGGT TTGGTTTGGG CTATGGTGAT ACTCCCGCGC AACGACATGC GACCTAACAG GACCTTAGGT ATGGGACTCA TTGCAATATA TCTGATATTC GTCACTTTCA GGCTCAGTTG CGCCATGGGA TTCATACCAT GGGCTGCTTA AAGAGCTATA TATAATCTTG T 
Length1981
Protein Sequence
Protein Residue
Map Locationscaffold_3: 5516230.. 5518210
Download Sequence
A.thaliana
AGI-codeAT3G14070.1
Descriptioncation exchanger 9
TAIR curator summaryInvolved in cation (K, Na and Mn) homeostasis and transport
Alias[ATCCX3][CAX9][CCX3][CATION CALCIUM EXCHANGER 3][cation exchanger 9]
Gene coexpression
MR
MR Locus Description
19.4165 Ahg323438 MA3 domain-containing protein
35.327 Ahg471244 SNF2 domain-containing protein / helicase domain-containing protein / zinc finger protein-related
36 Ahg482661 ARM repeat superfamily protein
38.923 Ahg481669 SIT4 phosphatase-associated family protein
48.8365 Ahg927522 Mitochondrial substrate carrier family protein
53.6656 Ahg324460 F-box/RNI-like superfamily protein
54.111 Ahg494278
64.2028 Ahg945006 pathogenesis related homeodomain protein A
64.6684 Ahg488153 Auxin-responsive GH3 family protein
68.7023 Ahg929022 histone acetyltransferase of the CBP family 5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression