Detail



ID : Ahg929448

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929448|scaffold_301905.1
Sequence
GTATCAAACG AGTACAAAAA ATGACGTCAC TCAACAGCTC TTCATCACCA ACACCGTCAT CATCTGACCA ATCTGATGCA ACTACTACAA CAAGCACCGG CTTGTCTGAA GAAGAAGCTC CACCGAGAAA CAACAGCACA AGAAAGAGAA GAAGAGATTC TTCTTCTGCT TCATCTTCTT CTTCTTCAAA GCAACATCCT GTTTACAGAG GTGTACGGAT GAGAAGTTGG GGCAAATGGG TCTCCGAGAT TCGACAGCCT CGTAAGAAAA CTCGTATTTG GCTCGGCACT TTCGCCACCG CTGATATGGC TGCTCGTGCT CACGACGTCG CTGCTCTCAC CATCAAAGGA TCCTCCGCCG TCATTAATTT CCCTGAGCTT GCTTCTCTCT TCCCTCGTCC GGCGTCGTCT TCGCCGCATG ATATCCAAGC AGCGGCCGCA GAAGCCGCCG CCATGGTGGT CGAAGAAAAA ATGTCGGATA CAGAGGCGAC GCCGGAGGAA CCACCGTCGT CGGAATCTTC TTACGTGGCG GCGGAGTCAG AGGAGGAGGA GAGGTTGGAG GAGATTGTGG AGCTGCCTAA CATTGAAGAA GGGAGCTATG ACGAGAGCGT GACGTCACGC GCTGATCTGG CTTATTCTGA GCCGTTCGAT TGTTGGGTGT ATCCTCCAGC TATGGATTTT TATGAAGAAA TATCGGAATT TAATTTCGTG GAATTATGGA GCTTTAATCA TTAATTAAGT TGTCATCTGT TTTT 
Length754
Protein Sequence
Protein Residue
Map Locationscaffold_3: 6489529.. 6490263
Download Sequence
A.thaliana
AGI-codeAT3G16280.1
DescriptionIntegrase-type DNA-binding superfamily protein
TAIR curator summaryencodes a member of the DREB subfamily A-4 of ERF/AP2 transcription factor family. The protein contains one AP2 domain. There are 17 members in this subfamily including TINY.
Alias
Gene coexpression
MR
MR Locus Description
5.56776 Ahg907410 SWIM zinc finger family protein
15.0997 Ahg896277 RNA binding;nucleic acid binding
27.3861 Ahg491180 SAUR-like auxin-responsive protein family
28.9137 Ahg925138 P-loop containing nucleoside triphosphate hydrolases superfamily protein
53.963 Ahg480611 phosphate transporter 3;3
62.7853 Ahg480695 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
69.7495 Ahg479675 UDP-Glycosyltransferase superfamily protein
78.7147 Ahg936543
79.8248 Ahg945603 HVA22 homologue D
98.7775 Ahg473289 Subtilase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression