Detail



ID : Ahg929746

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929746|scaffold_302203.1
Sequence
TTTGGTGCTT ACTAGTGGGG ATGGAAATGA GTGGTTTGGG AAGAAAACGT CTTTCAAAGT GGGACTCTAA GGAAGACACA CACCATCATC ATTCTAGCGT AAATGCAAAC TCGGGTTCTT ATTACCGCAA CAAAGAGTCT GAGCCTGTCC GGTTCAATGC AGAGAGTAAT GGTGAAGCTA GGACTGGAAG CAGAGTTTCA CAGAATAACG ATAACAGTTA TTTTTCTGAA CAAGATGATA CAAGGCAACA ATTTTTCCCT AGGAGTGCAA GTAAAAGTAA TAGCAGGAGT AGAAGCCGTA GTAGAAGCCC AGTCTATAGA GGTAGACGAG ATGCGGGATC ATATGATAGA CACAAGACAA GAACACAAGT TTCTCCTACG CCAATAAGGG AGTTCAATAA AAGAGGCAGT GATCATCAGT TTGATCAAAG AAGTGATTAT GGTTGGGAAG ATAACATTAG AAAGCCAAGG GAGACGAAGT ATCACACTGA AAATTTCAGA GAAGAGGCGA TGATGGAAGG TGCAATGTCT TCTGACTATA ATACTGATTA TCCCGAGGAT AATTCGAGAA GGGAGCATTT ACATGATGGC GGTTTAGACC CGAGAATGAG AAGGCACAGA AGCGAATTTA CGGGAGAGAA GGACACACAA AGAAGAGGTG GTGATGGTGA AGGAGGATTC CACAGGAGTT CGAATATTCC GTGCAAGTTT TTCGCTGCGG GGACGGGGTT CTGTCGTAAT GGCAAGTATT GCAGGTTTTC TCATCATGTT GCTGATAGAA AACAGCCTCA AGACAACAAC TTTTATAGAC AGGACAATAA CAATCATAGT AGTGGTCATA ATAAATGGAA TGATTTTGAA AGATTGGACA ATGGAAGAGT AGGTAGAATC GAAGTTTCTC GCGCCAGTAA GGGAGTTTCT GAATCTAAAG GGAATGGTAG TAGCTGGATT GATGACATGG AGATGTCTCC TGATTGGAAT TATGGAGTCC AAGCTTTAAA GAAGCCTGTG AAGGAAGAAC ATGGTGTTGG TATTATTGGT CAGAGTTCAC AATCTCGAGT TCTTAAAGAT GATCTGGTGA CTAATTATGA TCAGAGAAGT AGTGGTATGT TTTCACATGG TGACAAAACT ATGGCTGAGA AACCTATAGC TGCTTCACAT CAGAGTTACA GTAATTCAGT GAATGCTGCT CCAGTTCAAA CATTCAATCA GAATCATAAT GTATTGCCGT ACCAAAGCTC ACTAACTGCT GGAGGAAGTC AACAAGTGGT AGCTGCTGCT ACAAATTTCT CAGTAGGCTT GAACTTGAGC AATCTTGAGA GTGGAAAAGT TTATCAAGAT AATCATCACT CAACGGTGGA GAAACCTGTT TTGGTTCAAA ATACAGTAAG CAGGGAACAA ATCGATCAGA TTACCAACAT CTCAGCAACT ATAGCGCAGT TTCTTGCAAA TGGGCAGCCT ATTCCACAGC TTGAACAGGC ATTACAGATG CCGCTGCATT CAGAATCTTC CATGGCTGTT CAGCCAAATC AGGCTACTCA AAGTAATCCA GTGAGAAGTA ATCCAAATCA GTCATGGGGA CTAGGGATGA GCACTGGTGC TGAAGGAGTC CCAGCGGTTA CTGCATCAAA GGTAAGCAAT GTCGTTGGGA TTCAGGAACT ATCGCTAAAT CCCAAGGAAA ACAGGGACAA AAAGAATGAT GAAGCTAGCA AGGAAGAAGA GGGTAGGAAA ACTGGAGAAG ACACTAATGA TGCTGAGAAT GTCGTGGATG AAGATGATGA TGATGATGGG AGCGACGAAG AAAACAAGAA AGGGAAAGAC CCGAAAGGAA TGCGGGCATT TAAGTTTGCA CTAGTTGAGG TAGTAAAGGA GCTTCTAAAA CCAGCTTGGA AAGAAGGTAA GCTGAACAAA GATGGTTACA AAAACATAGT GAAGAAGGTA GCTGAGAAAG TGACTGGTAC AATGCAAAGT GAAAAGGTTC CTCAAACACA GGAGAAGATT GACCATTATC TATCCGCTTC GAAACCAAAA CTTACCAAGC TCGTGCAGGC ATATATCAGC AAAATCAAGA AGACATAATT TGAATTGGAC TCCCATGT 
Length2098
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7533707.. 7535981
Download Sequence
A.thaliana
AGI-codeAT3G18640.1
DescriptionZinc finger C-x8-C-x5-C-x3-H type family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.219 Ahg488679
26.4953 Ahg938480 Calcium-dependent lipid-binding (CaLB domain) family protein
35.0714 Ahg339179 Early-responsive to dehydration stress protein (ERD4)
45.2327 Ahg943129 Copper amine oxidase family protein
51.1468 Ahg485811 peptide transporter 1
57.4804 Ahg907478 Matrixin family protein
58.1722 Ahg477634 O-fucosyltransferase family protein
59.6322 Ahg493908 Domain of unknown function (DUF23)
60.0666 Ahg939814 Calcium-binding EF-hand family protein
64.707 Ahg932740
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression