Detail



ID : Ahg907478

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|907478|Al_scaffold_0002_559
Sequence
ATGGTACCAA TGAATCCAAT CTCAGCCAAA TTCTACTCCA ACGTCTCTTC AATTCCACCG TTACAATTCC TAAACGCAAC ACAAAACGCA TGGGAAACAT TCTCAAAACT CGCCGGTTGT CACATCGGAG AAAATATCAA CGGTCTCTCA AAACTCAAAC AATACTTTCG CCGTTTCGGT TACATCACCG GTACCAATAA TTGCACAGAC GATTTTGATG ACGTACTTCA ATCGGCGATC AATACTTACC AGAAAAATTT CAATCTCAAA GTCACCGGAA AACTCGATTC GTCGACTCTC CGGCAAATCG TTAAACCGAG ATGCGGGAAT CCGGATATGA TCGACGGAGT TTCGGAGATG AACGGTGGAA AAAAGCTTCG TGCGACGGAG CGGTACTCGT TTTTCCCCGG GAAGCCACGG TGGCCGAAAC GGAAACGCGA TCTGACTTAC GCGTTTGTGC CGCAGAATAA TCTAACCGAC GAGGTTAAAC GCGTGTTTGC ACGCGCCTTC ACGCGTTGGG CTGAGGTGAC TCCGTTGAAT TTCACGCGCT CTGAGTCTCT CCTCGGAGCT GATATAGTGA TCGGATTTTT CTCCGGTGAA CATGGTGATG GAGAGCCGTT TGATGGAGCG ATGGGAACAT TAGCGCACGC TTCGTCTCCT CCTACGGGGA TGTTACATTT AGACGGTGAT GAGGATTGGT TGATCTCTGA CGGTGAAATT AGCCGTCGGG TTTTACCGGT GACGTCGGTG GTGGATCTTG AATCGGTGGC GGTACATGAG ATCGGACATC TTTTAGGGTT AGGTCACTCG TCGGTGGAAG ATGCGATTAT GTTTCCGGCG ATTTCTGGTG GCGATCGGAA AGTGGAGTTA GCGAAGGATG ATATTGAAGG GATTCAGCAT TTGTACGGAG GAAATCCGAA CGGAGACGGT GGTGTTTCGA AGCCTAGCCG GGAGAATGAA TCCACCGGTG GCGCTGGTGA TAGCGTTCGT CGGTGGAGTG GGTTGGTGTT TATCCTATCA TCGATTGCCA CGTGTCTATG GTTGATTTGT GTTTAG 
Length1056
Protein Sequence
Protein Residue
Map Locationscaffold_2: 3198959.. 3200187
Download Sequence
A.thaliana
AGI-codeAT1G59970.1
DescriptionMatrixin family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.2829 Ahg902608 WD-40 repeat family protein / zfwd3 protein (ZFWD3)
16.9706 Ahg936076 GDA1/CD39 nucleoside phosphatase family protein
36.0555 Ahg473376 DZC (Disease resistance/zinc finger/chromosome condensation-like region) domain containing protein
41.9047 Ahg477504 Plant stearoyl-acyl-carrier-protein desaturase family protein
46 Ahg917192
49.1732 Ahg494047 Plant calmodulin-binding protein-related
53.9444 Ahg487303 Transcription elongation factor (TFIIS) family protein
56.1249 Ahg496564 diacylglycerol kinase 2
57.4804 Ahg929746 Zinc finger C-x8-C-x5-C-x3-H type family protein
63.8984 Ahg928811 senescence associated gene 20
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression