Detail



ID : Ahg929770

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929770|scaffold_302227.1
Sequence
GATGTAGGTA CATAATTTGC ATGAGATAAT GGCGGAGGGG CAATCCCCGG AGAATTCACC GCCGTCCCCT ACACCACCAT CTCCGTCCTC ATCCGACAAT CAACAACAAT CCTCTCCTCC GCCTTCTGAT TCCTCCTCTC CTTCACCACC AGCTCCTCCT CCGCCGGATG ATTCCTCCAA TGGTTCCTCT TCATCACCTC CACCGCCTTC TTCAGGCTCA GAATCTCCTC CATCTCCGCA AGGAAACAAC AACAATGATG GCAACAATGG TAATAACAAC AATGACAACA ACAATGGTAA TAGCAACAAT GGTAATAACA ACAACAATGA CAACAACAAC AATGGGAATA ACAAAGACAA CAACAACAAA TGGTCATAAC AACAATGGCA ATAACAACAA TGACAACAAC AACCAAAACA ATGGCGGAGG AAGCAACAAC CGTTCACCTC CGCCTCCTTC GAGAATCTCT GACCGTAACT CTTCGTCCCC ACCAAGAGCG CTGGCTCCGC CTAGATCAAG CGGTGGTGGT TCCAACTCCT CAAGTAACAA TGAACCAAAC ACGGCTGCTA TCGTAGGAAT TGTGGCTGGT GCTGGATTGT TGTTTCTTGT TATGATATTG TTCTGCGTCT GTTGCTGTCG TAAGAAGAAA AAGAAGCATC AAATGCCGTA TTATGCAGGC AACGGTTACG CCACCGGCAA AGGCGATCAA TACCAACAGC AGCAATACAA TAACCAGAGC GATCACGTGA TGAATCTGTC TCAGCAATAT CCTGGATCAA ACGGGAATAA TAACTGGATG AATTCACCGC CTCCACCACC ACCAGGAAGC TGGCAACCCT CGCCGCCACC ACCACCACCG CCTGTCTCAG GCGGTATGAA CGGAAACAGT AGCGACATGA GCTCAAACTA CTCAGGACCA CATGGTCCGT CTCTACCACC ACCTCACCCT TCAGTGGCTC TAGGTTTCAA CAAGAGCACA TTCACCTACG ACGAGCTAGC TGCTGCAACT CAAGGCTTCT CTCAAGCAAG ATTGTTAGGT CAAGGCGGGT TCGGGTATGT TCACAAGGGA ATACTTCCCA ATGGGAAAGA GATTGCGGTG AAAAGTCTAA AAGCGGGAAG CGGGCAAGGA GAGCGCGAGT TTCAGGCTGA GGTTGACATT ATTAGTCGAG TTCATCATCG GTTTCTTGTG TCTCTTGTTG GATATTGTAT TGCAGGAGGA CAGAGGATGT TGGTTTATGA GTTCTTACCT AATGACACAC TTGAGTTCCA TCTCCATGGT AAAAGTGGCA AGGTTCTTGA CTGGCCTACA AGACTCAAGA TTGCTTTGGG ATCAGCTAAA GGACTTGCTT ACTTACATGA AGACTGTCAT CCGAAAATCA TTCATAGAGA CATTAAAGCT TCAAACATTC TTCTTGATGA ATCCTTTGAA GCTAAGGTTG CAGACTTCGG GTTAGCGAAG CTATCTCAAG ACAATGTTAC ACATGTGTCC ACTCGTATCA TGGGAACTTT CGGGTACTTG GCTCCAGAGT ATGCGTCAAG CGGGAAGCTG ACAGACAGAT CCGATGTTTT CTCCTTTGGA GTGATGCTTC TTGAGCTCGT TACCGGACGC AGACCTGTTG ATCTCACTGG TGAAATGGAA GACAGTTTGG TCGATTGGGC AAGACCCTTA TGCTTAAACG CAGCTCAGGA TGGAGATTAC AGTGAACTAG TTGATCCACG GCTTGAGAAC CAATACGAGC CTCATGAGAT GGCACAAATG GTGGCTTGTG CCGCTGCAGC CATCAGGCAC TCAGCCAGAC GCAGGCCTAA GATGAGCCAG ATTGTTCGGG CTCTGGAGGG AGATGCATCT CTAGACGATC TAAACGAAGG AGGGAAACCG GGGCAAAGCT CATTCCTCGG GAGGGGATCA AGCTCGGACT ATGACTCAAG CACTTACAGT GCGGATATGA AGAAGTTCAG GAAAGTGGCC TTGGATAGCC ATGAGTACGG TGCAAGCAGC GAGTATGGGA ACACGAGCGA ATACGGGCTT GACCCGTCTT CCTCGAGCAG CGAGGAGATT CGTAGAGGAG GAGCTAACAA CAACAAAACC ACTCCTAGCC GAGAGCTTTG ATTTAGCTGT TAGTTTCAAA A 
Length2131
Protein Sequence
Protein Residue
Map Locationscaffold_3: 7618586.. 7621723
Download Sequence
A.thaliana
AGI-codeAT3G18810.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[AtPERK6][PERK6][proline-rich extensin-like receptor kinase 6]
Gene coexpression
MR
MR Locus Description
3.60555 Ahg490208 transposable element gene
3.87298 Ahg940858 Integrase-type DNA-binding superfamily protein
3.87298 Ahg924070 SKU5 similar 12
4.12311 Ahg335514 poly(A) binding protein 3
4.24264 Ahg351609 Protein of Unknown Function (DUF239)
5.2915 Ahg481664 transposable element gene
5.91608 Ahg478720 SKU5 similar 11
6.9282 Ahg900119
8 Ahg316947 Pectin lyase-like superfamily protein
9.64365 Ahg483350 late embryogenesis abundant domain-containing protein / LEA domain-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression