Detail



ID : Ahg929890

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|929890|scaffold_302347.1
Sequence
ATGCAAAAGA AGTTGATACA ATGTCTCTTC TCTGTGATCT TCAAATCAAT CTCAATAACC AATTCACTTT CTTCGTCAAT CAGGATTTGA TTTCAGAGTA CTCAGGGTTC TTGAGGAAGA TGATAAAACA GAGCAATAAG AAGAAGAAGA ATCACAAGAA CAGTAGAATC ATTATCGAAG TCGAAGATTT TCCAGGTGGG TCAGATGGGT TCGACTTGGT TTCAAGATTC TGTTACGGTA ATGGCGGAGG AATCTCGATC GATGTCTCAA ATGTTTCCAT TTTGCATTGT TCTTCTGTCT TCCTTGAGAT GACAGAGAAA CTCTGTTCCT CGAATCTTTT GCTTCAAACA GAGAAGTTTT TAGAAGGTAT GTTTTACTGG TCATGGAATG ACATCGTTTT GTGTCTCAAG AGCTGCGAAC AAGTGTTCCT ACACGCAGAT TCTTACGGTC TTGTTGATAA GCTTGTTTTC GGGGTTTTAG CCAAAATCGC TCAGAATTCA GACATGAGTC ATGTCTTTTC ATCATCCTCT CCGTCTTCCT CTGCCTCAGC CTCCTCTCAT TCGCCGGAGA CGGCAAGGAA TAGGTCTGAT TCTGACAAAC GGTCTACTTC GAGGTCGCTT TCTTGCAGGA CAAGTAACGA GTGGTGGTTC GACGATATGT CAATTCTCGG GCCAAAAATC ATTGAAAAGC TGATAAAAAC ACTTGGTGCG CATGATAAGA ACAATGACAG CTTGGTCCTC ACAAGATTTC TCCTCCATTA CCTCAAGACA AAGGTCCAAA ACAAATCAAA CTACAAGCTC GAGTATGCAG GTTTAGCTGA TACAGCGGTT CGAGGAGTGG TTTTCGCGGC GAAAACCGCG TTTTCCTGCA GAAAAATGTT CTGGGTTCTT CGCGTTTTAT CGGGATTTAG CATCAGTAAA GAATCAAGAA TTGGTTTAGA GAGAGTTATA GGAGAAATGC TGGATCAAGC AACACTTGAT GATCTTCTGA TACCCGCAGG AGGAAAAAAA GAAAAAGGGT TTTACGATGT GGATTTGGTG ATAAGATTAC TCAAAGTGTT TGTGAGAATT GGAAACACAG AAGAAGAACA GAATTTGAAA ATGAGAAGAA TTGGGAAGTT GATTGATAAG TATCTGAGAG AGATTTCTCC AGACCAGAGT CTTAAAGTGT CAAAGTTCCT TGAAGTTGCA GAGAGTTTGC CAGATTCAGC TAGAGATTGG TTTGATGGAT TATACAGAGC CATTGATATC TATCTTGAGT CTCATCCAAA ACTATCAACC GAGGATAGAA CAAAACTATG TCGATGTCTA AACTACAAGA AATTTACATT GGAAACATGC AAACAACTTG CGCAAAATCC CAAGATCCCT CCTAATATTG CAGTTCAGGC ACTTAAGTCA CAACAATTGT CAAACGAGAC TCAACCACAC TCAAGAGAGG ACAAGAAGAG AGTAAACAAG ATCTGGAATT CGCGTAAGTA CTTAGAAGAG AAACCAATAC TGGTGCATTT GAAAGGTTTT GGGATGTCGG AGAAGTTTAA AGATGATCTA AAGATGAATT TGGAGAGGAA GCAATGGAAT AGTTCTGGAA AAAATTGTAA GGAAAAGAAG AGTGAAGTAG TGTCAAGTTC TAGTTTTCCA AGGCTTTGTT AATTAATTCA CTCGTCATTT TTTTTC 
Length1676
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8120214.. 8122943
Download Sequence
A.thaliana
AGI-codeAT3G19850.1
DescriptionPhototropic-responsive NPH3 family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
19.105 Ahg893513
19.4936 Ahg483330 Basic-leucine zipper (bZIP) transcription factor family protein
20.9762 Ahg483835 Rho GTPase activating protein with PAK-box/P21-Rho-binding domain
23.1084 Ahg926846 Gibberellin-regulated family protein
24.4131 Ahg483654 Bifunctional inhibitor/lipid-transfer protein/seed storage 2S albumin superfamily protein
25.9808 Ahg470362 FASCICLIN-like arabinoogalactan 9
27.4226 Ahg895886 Protein kinase superfamily protein
28.3549 Ahg480739 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
29.6648 Ahg480130 CCCH-type zinc fingerfamily protein with RNA-binding domain
30.8545 Ahg923736
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression