Detail


ID : Ahg930001

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930001|scaffold_302458.1
Sequence
ATCTTGAAAA CAAAAAAAAA ATGAATCAAG ATCGAGACAC AGAACGTGGT GGAAACTGTT GTACTTGCTG CTTAAGCTTC ATCTTCACAG CTGGTCTCAC CTCTCTTTTC TTATGGCTTA GTCTCCGTGC CGGCAAACCC AAATGCTCAA TCCAAAACTT TTACATTCCT GCCCTCGGCA AAGACCTAAA TTCACGAGAC AATACCACTC TAAATTTCAT GGTTCGTTGT GACAATCCAA ATAGAGACCA AGGAATCTAC TACGACGATG TCCACCTTAA CTTCTCCACC ATCAACACGA CCAAGATCAA TTCCTCTGCT CTTGTCTTAG TTGCTAACTA CACAGTGCCT AAGTTTTATC AAGGACACAA GAAGAAGGCC AAGAAGTGGG GTCAAGTAAA GCCGCTAAAC AACCAGACCG TTTTACGAGC GGTTTTGCCT AATGGATCGG CGGTTTTCAG GTTGGATCTG AAGACTCGAG TGAGATTCAA GATTATTTTT TGGAAAACTA AGAGGTATGG GATTGAAGTT GGTGCTGATG TTGAAGTCAA CGGTGATGGA GTTAAAGCTC AAAAGAAAGG GATTAAGATG AAGAAATCTG ATTCTTCTTT TCCATTAAGA AGCTCTTTTC CGATTTGTGT TTTGATGAAT TTACTCGTAT TCTTGGCGAT TCGTTAACTT TGATTAATGG TGTTGATT
Length698
Protein Sequence
Protein Residue
Map Locationscaffold_3: 8536137.. 8536836
Download Sequence
A.thaliana
AGI-codeAT3G20600.1
DescriptionLate embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
TAIR curator summaryRequired for non-race specific resistance to bacterial and fungal pathogens.Mediates systemic acquired resistance (SAR) response.
Alias[NDR1][non race-specific disease resistance 1]
Gene coexpression
MR
MR Locus Description
4.69042 Ahg479585 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
5 Ahg476579 Protein of unknown function (DUF793)
9.16515 Ahg908965 nudix hydrolase homolog 21
9.38083 Ahg473657 Phosphate-responsive 1 family protein
11.6189 Ahg488600
12.083 Ahg472978 salt tolerance zinc finger
16.7332 Ahg312784 nudix hydrolase homolog 4
16.7929 Ahg945643 dicarboxylate carrier 2
19.105 Ahg923418 Protein of unknown function (DUF620)
20.1246 Ahg472100 Protein of unknown function (DUF793)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression