Detail



ID : Ahg472100

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|472100|fgenesh2_kg.1__2054__AT1G18740.1
Sequence
ATCATCATCA CTCTCTCTTA ATCCAACAAA AAAAAAAGCC TTTTATTTTC CAAGTCTGAG AATTTTCTAC AGAAACACAA ATCTGGTTTC CTTTTCGATA TTGCATCTGT TCTGAGGATG CCAGCTACGG ATTTTCAAGG ATCATTTGGA AGGTCGTTGC TAAGTTTACG GCGAGACCAA GTTGACTCAA CAACAGTCGT CGCCGGAAGT AGTAGCCACC ACGAGCCAAG CAACATGGAG GTTGAGCTAG ATTCGTTTCA AAGACAAGTC GCCGAGAAAT TCATCGATCT CAACGCCTCT TCAAACGACC TTCTCTCTCT CGAATGGATC GGGAAGCTTC TTGATTCTTT CCTCTGTTGT CAAGAAGAGT TTCGAGCTAT TGTATTCAAC CACCGATCTC AGATCTCAAA GTCTCCGATG GACCGTTTGA TTTCAGATTA CTTCGAACGG AGTATCAAAG CTCTCGATGT CTGTAACGCA ATCCGCGACG GAATCGAACA GATCCGTCAA TGGGAGAAAC TTGCCGACAT CATTATCTCT GCTTTAGATA GTCACCGTCC GATCGGAGAA GGACAGCTCC GGCGAGCTAA GAAAGCTCTG ATTGATTTAG CAATCGGAAT GCTCGACGAG AAAGATCATC CTTCTGGAAC CAATCTAGCT CATCGGAACC GTTCATTCGG AAGAGTCAAA GACAGTCACC ACCGTTCGAT TGGACATTTC AGATCTCTTT CCTGGAGTGT TTCAAGATCG TGGTCAGCTT CTAAGCAATT ACAAGCTTTG GCTAATAACT TAGCAACGCC TAGACCAAAC GACGTCGTTG CGAGCAATGG TTTAGCTGTA CCGGTTTACA CCATGACTTC GGTTTTGCTT TTTGTGATGT GGGTTTTGGT AGCTGCGATT CCTTGTCAAG ACCGTGGATT GCAAGTTAAC TTCTTTGTCC CTAGGCATTT CCAATGGGCA GCTCCGGTTA TGTCGTTGCA CGATAAGATT GTTGAGGAAT CTAAGAGACG AGATAGGAAG AATTGTTGTG GTTTGCTTAA GGAGATTGAT ATGATTGAGA AGAGTTCGAG GTTGATGAAT GAATTGATCG ATTCGATTCA TTTCCCGTTG AATGATCAGA AGGAGATTGA GGTGAAACAG AGAGTTGATG AGCTTGTTCA GGTTCGTGAA GCTTTGAAAG ATGGTTTGGA TCCGTTTGAG AGGAAAGTTA GAGAAGTTTT CCATCGGATT GTGAGAAGCC GAACCGAGAG TCTTGATTCT CTTTGATCTT GCACATGTTT GTCCGAATAT GATCATATTT GGATTTTTTT TTGTTTTCTT CTTCTTCTTC TCTATTTATC CTTTTTAATC ACTTGTAAAA AAGAAACTCA AAGAGTGTAG AAGTGTCATC TTCTTAACTC TTTGTGATGC TTATAGTGAT TATGTTCTTT GCGAAGCTAC TTGCTTAGTT TGTTGATAGA TTGAAGTTAA ATTTTTCGAT GAGCAGTAAC AAATACTTCA TTGAATATCA AAGATTACAT TCAAGAAACA AAAGAATCTT TATTGAGAGA AGAGATTCAA CTATCGGGTA TGTTTTACAA CATACAAAAA TCTACAACAC AATAAACTTC AGTTTCTCAT CTAATCTTCA AAATCTTCTG TTTTCTTGAG TCCAGCTTCA TGTTGGTAAC GTCCTACTTC ATTTCTTGCA AGTGATTCTT CCTGCAAATA GAGCTATGAT TAACGATTAG AACAGGACAA ACATCAGTTG TAGACAATTT TAATCAAGGT TTGCCTCAGA AATAAGTGAT ACTCATCACT GAAAATCTGA TAATACGTGC AATTGTTAAG GCACATCATT GGCAGAACCA ACACTAGATC AAAGTTGATA ATGCATCAGA GAGATTCCCA TCTAGACATT AGTCATCATT CTCATCTCCT AACTAGGAGA CTCTGATGTC CCTGTCTTTT CATCATCACT TGCGTTAATC AGACAACCAA ATCAAAGCAG AAACTAGAAG AGCTACGAAA ACCAAATCAT TAATAAGCTC AGAGAGTCCA GAGTAAAACA AGAGAAATCA GATGTGTAAA GAGAAGGAAA AAAAATGCCT CAGAGTTGAT TTTTTTTCCT AGAGAGTAGA GACGCATCTC TCAAAGTATA TTTAACACCA TCACAGGCAT CAAAATCA 
Length2168
Protein Sequence
Protein Residue
Map Locationscaffold_1: 7532316.. 7534738
Download Sequence
A.thaliana
AGI-codeAT1G18740.1
DescriptionProtein of unknown function (DUF793)
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.38516 Ahg472978 salt tolerance zinc finger
5.83095 Ahg312784 nudix hydrolase homolog 4
6.9282 Ahg476579 Protein of unknown function (DUF793)
8.12404 Ahg481911 Protein phosphatase 2C family protein
8.24621 Ahg921837 plant U-box 45
10.247 Ahg950444 Xyloglucan endotransglucosylase/hydrolase family protein
10.9087 Ahg908965 nudix hydrolase homolog 21
11.1803 Ahg471972 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family
11.4891 Ahg485035 zinc finger (C3HC4-type RING finger) family protein
12.2474 Ahg476631 Integrase-type DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression