Detail



ID : Ahg930468

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930468|scaffold_302925.1
Sequence
ATCAATTAGC ACGAATAGCA ATGGATAAAG ATTACTCGGC ACCAAACTTC TTAGGTGAAT CCTCAGGCGG AAACGATGAT AACAGCTCCG GTATGATAGA CTATATGTTC AATAGAAACC TTCAACAACA ACAAAAGCAA TCGATGCCAC AACAGCAGCA TCATCAACTG TCTCCTTCCG GATTTGGAGC AACACCTTTT GATAAAATGA ACTTCTCTGA TGTGATGCAG TTTGCGGACT TCGGTCCGAA ACTGGCGTTG AACCAGACCA GAAACCAAGA CGATCAAGAA ACCGGGATTG ACCCGGTTTA TTTCTTGAAG TTCCCTGTCT TGAACGACAA GATAGAGGAC CATAACCAAA CCCAACATCT CATGCCTTCT CATCAGACGT CTCAAGAAGG AGGTGAGTGT GGAGGAAACA TAGGCAACGT GTTTCTTGAA GAAAAAGAGG ATCAAGACGA CGACAACAAC TCCGTGCAAC TCCGTTTTAT TGGAGGAGAA GAAGAAGATA GGGAGAACAA GAATGTTACG ACAAAGGAGG TGAAGAGCAA GAGGAAGAGA GCTAGAACGA GCAAAACTAG CGAAGAAGTG GAAAGCCAAA GGATGACTCA TATCGCGGTC GAAAGGAACC GTAGGAAGCA AATGAATGAG CATCTTCGTG TTCTAAGATC TCTCATGCCT GGCTCCTACG TTCAAAGAGG AGACCAAGCG TCGATCATAG GAGGAGCAAT AGAGTTTGTG AGAGAGCTCG AGCAACTCCT ACAATGTCTA GAATCACAGA AGCGTCGAAG AATCCTAGGA GAAACCGGTA GGGACATGAC CACGACAACG ACTTCTTCTT CTTCTCCCAT AACTGCGGTA GCTAACCAAA CACAACCGCT CATTATTACT GGTAATGTAA CCGAACTAGA GGGCGGAGGA GGGCTTCGGG AGGAGACCGC GGAGAACAAG TCGTGCTTGG CTGACGTGGA GGTGAAGCTG CTAGGGTTTG ATGCCATGAT CAAGATACTT TCAAGAAGAA GGCCAGGACA ATTGATTAAG ACTATAGCTG CTTTGGAGGA TCTTCATCTC TCTATTCTTC ACACTAACAT CACTACCATG GAACAAACCG TCCTCTACTC CTTTAACGTC AAGATAACAA GTGAAACGAG GTTTACGGCA GAAGACATAG CAAGTTCCAT CCAACAGATA TTTAGTTTCA TTCACGCAAA TACCAACATG TAAGTATATA TCTCCTATTT AAA 
Length1243
Protein Sequence
Protein Residue
Map Locationscaffold_3: 10652325.. 10653989
Download Sequence
A.thaliana
AGI-codeAT3G24140.1
Descriptionbasic helix-loop-helix (bHLH) DNA-binding superfamily protein
TAIR curator summaryEncodes a basic helix-loop-helix transcription factor whose activity is required to promote differentiation of stomatal guard cells and to halt proliferative divisions in their immediate precursors. Both transcript and protein are expressed in and are required for halting divisions at the end of the stomatal lineage. It also has a role in the promotion of guard cell fate and in controlling the transition from guard mother cell to guard cell.
Alias[FMA][FAMA]
Gene coexpression
MR
MR Locus Description
24.1868 Ahg484057 Auxin efflux carrier family protein
26.533 Ahg485412 GRAS family transcription factor
32.0312 Ahg890387 Kinase-related protein of unknown function (DUF1296)
35.4683 Ahg925805 MADS-box family protein
36.2491 Ahg895886 Protein kinase superfamily protein
41.6653 Ahg930194 IQ-domain 5
42 Ahg483086 TRICHOME BIREFRINGENCE-LIKE 33
48.4768 Ahg938912 pectin methylesterase 61
57.9655 Ahg915422 Disease resistance protein (NBS-LRR class) family
61.1637 Ahg497463 HXXXD-type acyl-transferase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression