| Annotation |
|---|
| Description | jgi|Araly1|484057|fgenesh2_kg.5__49__AT2G01420.1 |
| Sequence |
ATTACTGTAC TTTTCTCTCT TAACGGTTTC TTTATTATTC TTCCCACCGA AAAGTAAAAA ATGATTACGT GGCACGACTT GTACACCGTC CTCACCGCCG TGGTGCCACT TTACGTCGCC ATGATTCTTG CCTACGGATC CGTGCAGTGG TGGAAGATAT TCTCCCCTGA CCAGTGCTCC GGCATCAATC GCTTCGTCGC CATTTTCGCC GTCCCTCTCC TCTCCTTCCA CTTCATCTCC ACCAACGATC CTTACGCCAT GAACTTCCGC TTCGTCGCCG CCGACACGCT TCAAAAGATC ATCATGCTCG TCTTGCTTGG TCTATGGGCT AATCTAACCA AGAACGGTAG CTTGGAGTGG ATGATCACCA TCTTCTCTCT CAGCACTCTC CCAAACACTC TTGTCATGGG AATCCCTTTG TTGATCGCCA TGTACGGGAC TTACGCTGGC TCTCTCATGG TTCAAGTCGT TGTTCTTCAG TGTATCATTT GGTACACTCT CCTTCTCTTT CTCTTCGAGT ACCGTGGCGC TAAGCTTTTG ATTATGGAGC AGTTCCCGGA GACTGGTGCG TCCATTGTCT CCTTTAAAGT TGAATCCGAC GTCGTTTCTC TCGACGGTCA TGATTTTCTT GAGACGGATG CTGAGATCGG AAACGACGGG AAGCTTCATG TTACGGTGAG GAAATCAAAC GCTTCGAGAC GGTCACTGAT GATGACTCCT CGGCCTTCCA ATCTCACCGG AGCTGAGATC TATAGTCTTA GTTCGACTCC GAGAGGTTCT AATTTTAACC ATTCTGATTT TTACTCGGTG ATGGGATTTC CCGGCGGGAG GCTCTCTAAC TTTGGTCCGG CGGATCTATA CTCCGTTCAA TCTTCTCGTG GTCCGACTCC ACGGCCTTCT AATTTCGAAG AGAACAACGC CGTGAAATAT GGATTTTACC CTAACACTAA CACGAGTTCT GCTCCGGCGT ACCCGGCTCC GAACCCGGAG TTCTCCTCCG GTACGGCTGT TACAACTAAA CCGAATAAAA TCCCAAAAGA AAACCAACAA CAGCTTGATA AGGATAACAA AGCGAGCCAC GACGCTAAGG AGCTTCACAT GTTTGTTTGG AGCTCAAGCG CTTCGCCGGT CTCCGACGTG TTTGGCGGAG GTGCAGGTGA ACACGTGGCA ACGGAACAAT CTGAACAAGG TGCTAAGGAG ATCCGGATGG TTGTTTCTGA TCAACCTCGA AAGAGTGGTG GTGATGATAT CGGCGGTGGT GATATTGGGG AGGGAGAAAG AGAGATAGAG AAAGCTACAG CAGGGCTGAA TAAAGTGGGG TCTAATTCCA CGGCAGAGCT AGAGGCGGCT GGTGGAGATG GCGGCGGAGG CGGCAACGGA ACACATATGC CGCCGACAAG TGTGATGACG AGACTGATAC TGATAATGGT GTGGCGAAAA CTCATCAGAA ACCCAAACAC ATACTCCAGT CTAATCGGTC TCATATGGGC TCTTGTTGCT TACCGGTGGC ATGTGGCTAT GCCAAAAATA CTACAACAAT CCATCTCCAT ACTCTCAGAT GCTGGTCTTG GAATGGCTAT GTTCAGCTTA GGTCTATTCA TGGCACTTCA ACCCAAAATC ATTGCTTGTG GGAACTCTGT CGCCACGTTT GCCATGGCCG TCAGATTTAT AACCGGTCCG GCCATCATGG CTGTTGCTGG GATTGCCATT GGGTTACACG GGGACCTTCT CCGTATAGCC ATCGTCCAGG CTGCGTTGCC TCAAGGAATA GTTCCGTTTG TGTTTGCAAA AGAGTACAAT GTGCATCCCA CGATTCTAAG CACTGGGGTC ATATTTGGAA TGTTAATAGC TTTACCCATA ACTCTGGTCT ACTATATTCT TCTTGGCCTC TGAATTGGTC CCTTCAGTTT CAACTGGCTT TTGAGAGCGC CTCGGAGATT GGGTTATTTA TTTCTCGGTA ACCAGGAAAT AAACAAAGCT TTTTATTTTC GTGGGAAAGA GTGGTAGGTG AAGAAGAAGA TATGCCTTTG GTTTTTGCTT CCAATATTTG TGGAACACAA CAAAAGTACT TAGGATTTAG TGAACAAGAT TTGAATGGAT TAAGGATCTT GTCTTCATTA GACGCCAAGA AGATAAAAGC ACTCTTCCAT CTATCTTTAT TTTTTCATTT TCTGTTTTTG TTAATTTATG TGTAGATTTT GGCTAAGC |
| Length | 2208 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 195300.. 198333 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G01420.2 |
| Description | Auxin efflux carrier family protein |
| TAIR curator summary | Encodes a putative auxin efflux carrier that is localized in developing and mature root meristems. It is involved in the maintenance of embryonic auxin gradients. A role for AtPIN4 in generating a sink for auxin below the quiescent center of the root meristem that is essential for auxin distribution and patterning is proposed. In the root, PIN4 is detected around the quiescent center and cells surrounding it, and localizes basally in provascular cells. PIN4 expression is upregulated in brassinosteroid-insensitive mutant (PMID 16141452). |
| Alias | [ATPIN4][PIN4][ARABIDOPSIS PIN-FORMED 4][PIN-FORMED 4] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 4.79583 |
Ahg472083 | |
| 6 |
Ahg900167 | 3-ketoacyl-CoA synthase 10 |
| 6.32456 |
Ahg474507 | STRUBBELIG-receptor family 6 |
| 6.9282 |
Ahg927296 | D-mannose binding lectin protein with Apple-like carbohydrate-binding domain |
| 7.07107 |
Ahg895886 | Protein kinase superfamily protein |
| 8.30662 |
Ahg926846 | Gibberellin-regulated family protein |
| 10.198 |
Ahg495036 | Leucine-rich repeat protein kinase family protein |
| 10.583 |
Ahg473497 | GT-2-like 1 |
| 10.6301 |
Ahg928231 | Plant protein of unknown function (DUF828) |
| 11.225 |
Ahg481966 | Phototropic-responsive NPH3 family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|