Detail



ID : Ahg930902

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930902|scaffold_303359.1
Sequence
AAAAGAAACA CAAATCAACA ATGGCGGTGA AGAAGAAAGT TTCATGGAGA TCATTAATCG TTGGATGTTT AGGAGATCCA GAAACCCTAG TGGCTTCTTC AAAGAAACCT AAAAGAAAAG ATGACGTCAT CAAGAAACAG AGCTCTTTTC AAAGACTATC GATTCTTGAT ATGAGCAATC CAAGTTCCAA CACTTTATCA GAAGATCTAT CGATTTCTTT GGCCGGATCA GATCTCCATG TGTTTACCCT AGCAGAGCTT AAAGTCATTA CACAAAGCTT TTCATCGACT AATTTCCTCG GTGAAGGAGG GTTTGGTCCT GTTCATAAGG GTTTCATCGA TGATAAGCTA CGTCCTGGTC TTAAAGCTCA GCCTGTTGCT GTTAAATTGC TTGATCTTGA AGGTCTTCAA GGTCACCGTG AATGGCTGAC GGAAGTTATG TTTTTGGGAC AATTGAAGCA TAAAAACTTG GTGAAATTGA TTGGTTATTG TTGTGAGGAA GAACATAGAA CTCTTGTTTA TGAGTTCATG CCTCGTGGAA GCTTAGAGAA TCAACTTTTC AGAAGATACT CTGCCTCGCT TCCATGGTCA ACAAGAATGA AGATCGCTCA TGGAGCTGCA ACAGGACTTC AATTCTTACA CGAAGCCGAA AATCCCGTTA TCTATCGGGA TTTCAAAGCC TCGAATATCT TGTTAGATTC GGATTACACG GCGAAACTCT CTGACTTCGG GTTAGCCAAA GACGGACCAG AAGGAGACGA CACTCACGTG TCAACGCGAG TGATGGGCAC ACAAGGCTAC GCGGCTCCTG AATACATCAT GACCGGTCAT TTAACAGCAA GAAGTGACGT GTACAGCTTC GGAGTCGTGT TGCTCGAGCT TTTGACTGGA CGAAGATCAG TAGACAAAAA GAGATCATCG AGGGAACAGA ACCTAGTGGA CTGGGCTCGT CCAATGCTCA ATGACCCACG TAAACTATGT CGAATCATGG ACCCGAGACT TGAAGGTCAG TACTCAGAGA CAGGAGCAAG AAAAGCAGCA ACATTGGCTT ACCAATGTTT AAGCCACCGA CCCAAGAACC GGCCTTGTAT GAGTGCCGTC GTCTCTATAC TCAATGATCT TAAGGACTAT AATGATATTA CTATGGGGAC ATTCACTTAC ACGGTGCCAA ACACTCCGGA CAAGTCAGTC TCGGACAATA AAGAAGATGA AGGTCGTGTT GGTAATAAGC CACGTAAGAG TAGTCATCAT CATCATCAAC AACAAAGTAA TCATCCCCGG TCGTCACCAT CACCAATGGC CAAGTCTCCA TCGCCGACGA CCAAGTCGCC ATCTCCCACG GCCAAGTCGC CGAGGAATTC CAGAGAAAAC CACCGGAGAA CATTGAGAAA TGGAGTGAAT TCGCCGTTGA GAAGTGAGGC AGGTGGGGAA CGGTACTGAG TTTTCTAGTC TCACCTACT 
Length1459
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13572301.. 13574124
Download Sequence
A.thaliana
AGI-codeAT2G05940.1
DescriptionProtein kinase superfamily protein
TAIR curator summary
Alias[RIPK][RPM1-induced protein kinase]
Gene coexpression
MR
MR Locus Description
9.38083 Ahg942000 pseudo-response regulator 5
10.5357 Ahg486604 Arabidopsis thaliana protein of unknown function (DUF821)
22.2261 Ahg946262 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
22.3159 Ahg489982 glutathione peroxidase 6
28.775 Ahg485520 Tautomerase/MIF superfamily protein
30.249 Ahg936283 Protein of unknown function (DUF1644)
35.2704 Ahg910871 Protein of unknown function (DUF761)
37.47 Ahg485035 zinc finger (C3HC4-type RING finger) family protein
42.2137 Ahg483978 B-box type zinc finger protein with CCT domain
43.8178 Ahg939656 pseudo-response regulator 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression