| Annotation |
|---|
| Description | jgi|Araly1|942000|scaffold_602544.1 |
| Sequence |
CAAGTGTTTG TGTTGTGATA ATGAGTAGCG AGGAAGTTAT TGAAGTGACG GTGGTGAAAG CAGCTGAGGC TGGTGGAGGA AAGTTATCAC GGCGGAAGAT GCGGAAGAAA GACGCCGTAG ATGGCGGCGG CGATGGTTTG GTGAAGTGGG AGAGGTTTCT CCCGAAAATC GCGCTAAGAG TTTTGCTTGT TGAAGCTGAT GATTCGACTA GACAGATTAT CTCTGCTCTT CTCAGGAAAT GTAGTTACAG AGTTGCTGCT GTGCCTGATG GCTTAAAGGC TTGGGAGATG CTTAAAGGAA AACCCGAAAG CGTCGATTTG ATACTAACAG AGGTTGATCT GCCTTCGATC TCTGGTTACG CTCTGCTAAC ACTTATCATG GAGCATGATA TCTGCAAGAA CATTCCTGTT ATAAGTACGG ACTCGGTGAA TACTGTGTAT AAGTGTATGT TGAAAGGTGC GGCTGATTAT CTTGTTAAGC CGTTGAGGAG GAATGAGCTG AGAAATCTCT GGCAACATGT CTGGAGAAGA CAAACTTCAC TCGCTCCTGA TAGCTTTCCG TTGGATGAGA GACAGCAGAA AGCCGAGGGT GCGTCTGCAA ACAATTCGAA CGGAAAGAGA GACGAGCATG TTGTAATTGG GAATGGTGGT GATGCTCAGA GCTCGTGTAC AAGACCAGAG ATGGAAGGCG AGAGCGCAGA CGTGGAGGTC AACGCGAGAG ACGCAGTTCA GATGGAGTGC GCAAAGTCTC AGTTCAAAGA GACACGGCTT CTAGCAAATG AGATGCAGAA TTCATCGAAA AAAGCCATTG ACTTCATGGG AGCATCGTTT AGAAGAACTG GACAACGTAA CAGAGAAGAA AGTGTTGCCC AATACGAATC TCGGATAGAG CTTGATCTCT CTCTGAGAAG ACCTATCGCT TCCGAGAACC AATCTTCTGG AGACCGGCCT TCTCTTCATC CTTCTAGTGC CTCAGCTTTC ACACGGTACG TTCACAGGCC ATTGCAGACA CAATGTTCGG CCTCCCCGGT GGTTCCTGAT CAAAGAAAGA ATTTTGCGGC AAGTCAAGAT GATAACATTG TGCTAATCAA CCAATACAAT ACATCTGAAC CACCTCCAAG TGCTCCAAGA AGAAACGACA CCAGCTTTTA CACTGGAGCT GACTCACCGG GTCCACCGTT TAGTAATCAG ATGAATTCTT GGCCAGGACA GGGTTCTTAC CCAACGCCAA CCCCCATCAA TAATATACAG TTCAGGGGTC CCAACACAGC TTATGCATCT GCAATGGCTC CTGCTTCAGT CTCCCCAAGC CCTAGTTCCG TTAGCCCACA TGAATACAGT TCCATGTTTC ACCCATTCAA TGGTAAACCC GAGGGTTTGC AAGAGCGAGA TGGTTCCATG GATGTAGAGG AGAGGAGATA CATCTCTTCT GCAACCGAAC ATAGTGCAAT AGGCAATCAC ATTGATCAGC CTATTGAGAA GAAGAACGAA GATGGATATT CATCGTCTGT CGGGAAATTT CAGCAATCTC TTCAACGGGA AGCTGCTTTA ACCAAATTCC GGATGAAGCG TAAGGACAGA TGTTTTGAGA AAAAGGTTCG TTATGAGAGC CGTAAGAAAC TGGCAGAGCA ACGACCGCGA ATCAAAGGCC AATTCGTTCG TCAAGTCCAA TCCACACAAG CTCAACAGTG ATCCAACAAA TTGATATATT A |
| Length | 1711 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_6: 10100875.. 10103611 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G24470.1 |
| Description | pseudo-response regulator 5 |
| TAIR curator summary | Encodes a pseudo-response regulator whose mutation affects various circadian-associated biological events such as flowering time in the long-day photoperiod conditions, red light sensitivity of seedlings during early photomorphogenesis, and the period of free-running rhythms of certain clock-controlled genes including CCA1 and APRR1/TOC1 in constant white light. Acts as transcriptional repressor of CCA1 and LHY. |
| Alias | [APRR5][PRR5][pseudo-response regulator 5] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 2 |
Ahg475919 | flavin-binding, kelch repeat, f box 1 |
| 2.23607 |
Ahg477024 | light-regulated zinc finger protein 1 |
| 2.82843 |
Ahg480799 | F-box family protein |
| 3.16228 |
Ahg921302 | gigantea protein (GI) |
| 3.87298 |
Ahg486604 | Arabidopsis thaliana protein of unknown function (DUF821) |
| 4 |
Ahg910871 | Protein of unknown function (DUF761) |
| 4.24264 |
Ahg482064 | 16:0delta9 desaturase 2 |
| 5 |
Ahg923649 | Cation efflux family protein |
| 6 |
Ahg483978 | B-box type zinc finger protein with CCT domain |
| 6.48074 |
Ahg939656 | pseudo-response regulator 7 |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|