Detail



ID : Ahg930903

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930903|scaffold_303360.1
Sequence
CTTATGCCGG ACAATACATA ATGCAAAGAT TTCTTGACCT AAAACTCAAG CCATGGCTCA GAAACTTACT AACACGATGT TTAGCTATAA TCCCGAGTCT AATCGTTTCT CTCATTGGTG GTTCTGCTGG AGCCGGAAAG TTAATCATCA TTGCCTCGGT GATCTTGTCC TTTGAGCTCC CGTTCGCGCT GGTTCCCCTC TTGAAATGTA CAAGCTGCAA AACCAAGATG GGTTCACACG TCAACTCAAT TTGGATCACA GCTTTGACTT GGATTATTGG ATTACTCATC ATGGGAATAA ACATATACTA TATAGTAACC AGTTTCATCA AGCTGCTTCT CCATAGTCAT ATGATGCTTG TCGCCGTCAT CTTCTGTGGA ATTCTTGGGT TCGCAGGTAT TGCTATCTAT TTAGCGTCCA TAGCTTACCT TGTCTTTAGG AAAATAAATA AATAAATAAA TTATGTCATA GTCTA 
Length475
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13579441.. 13579916
Download Sequence
A.thaliana
AGI-codeAT1G80830.1
Descriptionnatural resistance-associated macrophage protein 1
TAIR curator summaryThought to be involved in iron homeostasis. Induced in leaves in response to iron deficiency. Transgenic plants accumulate toxic levels of iron. Gene complements yeast iron uptake mutants.
Alias[ATNRAMP1][NRAMP1][PMIT1][natural resistance-associated macrophage protein 1]
Gene coexpression
MR
MR Locus Description
3.31662 Virus1449
6.78233 Ahg352252 Protein phosphatase 2C family protein
9.32738 Ahg924434 Protein of unknown function (DUF784)
10 Virus0431
20.1246 Virus1887
20.9762 Virus1769
23 Ahg923524 ubiquitin-specific protease 8
24.4949 Virus1616
24.7386 Ahg490886 cytochrome P450, family 81, subfamily D, polypeptide 3
25.923 Virus1087
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression