Detail



ID : Ahg930924

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|930924|scaffold_303381.1
Sequence
GTGGGTGTGT AAGCAAAATC AAATGGAGTG GGATAGTGAT TCCGATCTCA GCGGTGGAGA TGAGGTGGCG GAGGATGGAT GGTTCGGCGG AGGTAACAGA GCGATTCCGT TTCCGGTAGG TAGTCTTCCT GGAACAGCGT CGTGTGGTTT TGTGGTCAGC GATGCTCTTG AACCTGATAA CCCTATCATT TATGTTAACA CTGTTTTTGA GATTGTTACT GGTTATCGAG CTGAGGAAGT TATTGGTCGA AATTGGTGAG TTTTCTCTTC TTGACTTTTA C 
Length281
Protein Sequence
Protein Residue
Map Locationscaffold_3: 13708047.. 13708327
Download Sequence
A.thaliana
AGI-codeAT2G18915.2
DescriptionLOV KELCH protein 2
TAIR curator summaryencodes a member of F-box proteins that includes two other proteins in Arabidopsis (ZTL and FKF1). These proteins contain a unique structure containing a PAS domain at their N-terminus, an F-box motif, and 6 kelch repeats at their C-terminus. Overexpression results in arrhythmic phenotypes for a number of circadian clock outputs in both constant light and constant darkness, long hypocotyls under multiple fluences of both red and blue light, and a loss of photoperiodic control of flowering time. Although this the expression of this gene itself is not regulated by circadian clock, it physically interacts with Dof transcription factors that are transcriptionally regulated by circadian rhythm. LKP2 interacts with Di19, CO/COL family proteins.
Alias[ADO2][LKP2][ADAGIO 2][LOV KELCH protein 2]
Gene coexpression
MR
MR Locus Description
4.12311 Virus0160
6.9282 Virus1122
10.9087 Ahg910974
17.5499 Ahg924557
18.3303 Ahg952015 Zinc finger (CCCH-type/C3HC4-type RING finger) family protein
21.4942 Virus3489
28.775 Ahg923205 ATP binding microtubule motor family protein
31.496 Ahg936680 basic helix-loop-helix (bHLH) DNA-binding family protein
32.5576 Virus3552
33.5708 Ahg337814
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression