Detail



ID : Ahg931106

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|931106|scaffold_303563.1
Sequence
CAATCTCTTC TTCTTCGAAC GATGATTAAT AGTTCTCAAA TCTCTTCTTC TTCTATGTCA ACCCAGGTCC CAACAATGAA AATAGGATGG ACTTGCTTTT ACATCGGTGT GACTGCTGTT GCTTTTGGAT CGTCTTACTA TCATCTTCAC CCAAATGATG CTGCTCTCCT CTGGGATCGT CTTCCCGTAC GCTCTTGCTC TTTCTCTTCA CTCTATGATA CTGCTTTTGT TTGCTTTGTC TTGTTTTTGA TCACTGGTTT TGCTTGGTTT TTTGATTTAG ATGACTATTG CATTGTTCCT TTTCTTCTTG CTGGTCTTGT TAGCATTTTA TATTGGAGGT TTTTCGATGA CTTTATACCA TATGCTTTAG TCTAGTTTGT TCCTTGCATT GTGAT 
Length395
Protein Sequence
Protein Residue
Map Locationscaffold_3: 17293386.. 17294249
Download Sequence
A.thaliana
AGI-codeAT1G71190.1
Descriptionsenescence associated gene 18
TAIR curator summarySenescence associated gene (SAG). Expression induced by ozone. Encodes a plant-specific protein of unknown function. Based on a personal communication from David Meinke (08/21/2007), this gene is not allelic to TTN4, even though this has been stated previously in a publication.
Alias[SAG18][senescence associated gene 18]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg937171 lanosterol synthase 1
9.94987 Ahg337685 histone acetyltransferase of the CBP family 4
12.2474 Ahg494865 Pectin lyase-like superfamily protein
17.3205 Ahg473654 auxin response factor 14
18.2209 Ahg924343 F-box associated ubiquitination effector family protein
18.4391 Ahg484650
19.1572 Ahg318837 WIP domain protein 4
21.0713 Ahg891747 NAC domain containing protein 94
21.6333 Ahg912924
21.9089 Ahg492107 START (StAR-related lipid-transfer) lipid-binding domain
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression