Detail



ID : Ahg494865

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|494865|fgenesh2_kg.8__681__AT5G48140.1
Sequence
AAAAATAAAA ATAAATAAAA GTAATCACTA GCTAGTGACT AAAATAAATC CCAATTATGG GTCGTGTACA TTTTGGAGTA TCAGCATTCT TTGTTTTTTG TTTGTTATGT TTATCAGCTA ATGCAAAGGT CTTCAACATT GGTTCTCCTC CAGGTTCTGA TATCACCAAC GCATTGTTGA AAGCATTCAA TGAGGCATGC CAATTCCCGA CAAAGAGCAC CGTTCTGATC CCAAAAGGTG AATACAAGCT TGGGGAGATC GTGATGATGG GTCCATGCAA AGCTCCTATA ACGATTGCTC TTCAAGGTAC CGTGAAAGCC GACGGTAACG CTAATGGAAA GGAGAAATGG GTCGCTTTCC GCAATATTGA TGGGTTTAAG TTGAACGGAG GTGGTGTTTT CGACGGTGAA GGAAACGCAG CATGGAGGGT CAACAACTGC CACAAGACTT TCAACTGCAA GAAACTCCCC ATCAGCATCC GTTTTGATTT CGTGACCAAC GCGAAAATTA GAGGCATAAC CTCCTTAGAT GCAAAGAACT TCCACATTAA CGTGATCGGT GCAAAGAACA TGACATTCGA AGACGTCAAG ATCATCGCCC CTGCAGAGAG TCCCAACACC GATGGTATCC ACGTTGGAAG AAGTGACGGA ATCAAGATCA TCAATTCATT TATCTCCACA GGAGATGACT GTGTCTCTGT TGGAGATGGA ATGAAGAACC TTCTTGTCGA AAGAGTTACA TGCGGTCCGG GACATGGAAT CAGTATTGGA AGTCTTGGAA GGTACAGCCA CGAGGAAAAC GTCAGTGGCA TCAAGATCAT CAACTGCACC CTCCAAGAGA CTGACAATGG GCTAAGGATC AAGACATGGC CTTCTGCAGC TTGTACCACA ACCGCCTCCG ATATCCATTT CGAGAACATC CTCCTCAAGA ACGTCAGCAA CCCCATCCTC ATCGACCAAG AGTACTGCCC ATGGAACCAA TGCAACAAGC AGAAACCATC AACAATCAAG TTGGCCAACA TAAGCTTCAA GAAGATCAGA GGAACATCAG GAAACAAAGA CGCGGTGAAG CTTTTGTGCA GCAAGGGACA TCCATGTCAG AACGTGGAGG TAGGTGACAT TAACATCAAG TATACCGGAG CCGACGGTCC AGCGACTTTC CAATGCTCAA ACGTATCACC AAAGCTTGTG GGAACTCAGA TTCCAAAAGC GTGTAGCAGC CCGGTGACAA AGCCACCAAA GTAGAAAGTG TGTATATATT ATATGCTCAT ACACAATCTA AATGTATACC CTAGTGTATG CTGTACGTAT GCTTTCAATT GATATCTTTG TGAAATAACC TATTTTTTTG AGCTTTTGGC TATATTGTAA GAAATGAATC CTTCTTG 
Length1387
Protein Sequence
Protein Residue
Map Locationscaffold_8: 10736513.. 10738231
Download Sequence
A.thaliana
AGI-codeAT5G48140.1
DescriptionPectin lyase-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Ahg323966
2 Ahg351806 Galactose oxidase/kelch repeat superfamily protein
3.4641 Ahg890578 HSP20-like chaperone
4.24264 Ahg351608 Protein of Unknown Function (DUF239)
4.3589 Ahg475725 Subtilase family protein
4.69042 Ahg927887 MATE efflux family protein
4.89898 Ahg944327 zinc finger (C2H2 type) family protein
4.89898 Ahg950383 Auxin efflux carrier family protein
5 Ahg470978 plant glycogenin-like starch initiation protein 5
5.19615 Ahg897485
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression