Detail



ID : Ahg932329

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|932329|scaffold_400317.1
Sequence
CCTTACTTTC GTTTCTTCAA AAAAAAATGG CTCAGGTTCA AGCTCCTTCT TCACATTCTC CTCCTCCGGT TGTTAACGAC GGGTCGGTGA CGGCTTCTGC TACACCTGGA ATCGGCGGCG GAGATGGAGT CAATCACGGT GCTCTTTGTT CTCTCTATGT TGGAGATCTG GATTTCAATG TTACGGATTC TCAGCTTTAT GACTATTTCA CCGAGGTTTG TCAGGTTGTT TCTGTTCGTG TTTGTCGTGA CGCTGCTACC AATACTTCTC TTGGTTATGG TTATGTCAAC TACAGCAACA CCGAAGATGC GGAAAAGGCT ATGCAGAAGT TGAACTATAG TAGTCTCAAT GGGAAGATGA TTCGGATTAC TTACTCGTCT CGTGACTCTT CTGCTCGCAG AAGTGGTGTT GGGAATTTGT TTGTAAAGAA TTTGGATAAG TCAGTTGATA ACAAAACTCT GCACGAGACG TTTTCCGGGT GTGGGACGAT TGTGTCCTGT AAGGTTGCTG CTGATCATAT GGGTCAGTCT AGAGGATATG GGTTTGTGCA GTTTGATACT GAGGATTCAG CTAAGAATGC TATTGAGAAG CTGAATGGCA AAGTGTTGAA TGACAAACAG ATTTTCGTTG GACCTTTTCT CCGTAAGGAG GAAAGAGAGT CTGCTGCTGA TAAGATGAAG TTTACCAATG TTTATGTGAA GAATCTGTCG GAGGCGACTA CTGATGATGA GTTGAAGACT ACTTTTGGTC AGTATGGTAG TATTTCGAGC GCTGTGGTTA TGAGGGACGG AGATGGGAAA TCTAGGTGTT TTGGATTTGT CAACTTTGAG AATCCTGAAG ATGCTGCCCG TGCTGTTGAA GCTCTTAACG GAAAGAAGTT TGATGATAAG GAGTGGTATG TTGGTAAAGC TCAGAAGAAA TCTGAGAGGG AACTTGAGTT GAGCCGAAGA TATGAACAAG GCTCAAGTGA TGCAGGAAAC AAGTTTGATG GGTTGAATTT ATATGTTAAA AACCTTGATG ATACCGTCAC CGATGAAAAG TTGCGTGAGT TGTTTGCTGA ATTTGGTACA ATTACGTCTT GCAAGGTTAT GCGGGACCCT AGTGGTACTA GCAAAGGATC AGGATTTGTT GCCTTCTCTG CTGCCAGTGA AGCTTCTAGA GTGCTGAATG AAATGAATGG TAAAATGGTT GGTGGTAAAC CATTGTATGT CGCTCTTGCA CAGAGGAAAG AAGAAAGAAG GGCTAAGCTG CAGGCTCAGT TTTCTCAAAT GAGACCTGCT TTTATCCCCG GTGTGGGTCC TCGAATGCCA ATATTTCCAG GTGGTGCTCC AGGTCTTGGA CAACAGATCT TTTACGGTCA AGGGCCTCCA CCAATCATCC CTCACCAGCC TGGATTCGGT TATCAGTCTC AGCTGGTTCC TGGATTGAGA CCAACCTTTT TCCCGATGAT GCAGCCTGGT CAGCAAGGTC CACGACCAGG TGGCAGGCGG TCAGGCGATG GACCCATGCG CCCCCAGCAT CAGCAGCCAA TGCCTTATAT GCAGCCTCAG ATGATGCCAA GAGGACGCGG ATACCGTTAC CCTCCTGGTG GTAGAAACAT GCCTGACGGT CCAATGCTAG GAGGCATGGT TCCAGTTGCC TATGACATGA ATGGAATGCC TATTGCTCAG CCTATGTCTG CTGGTCAATT GGCTACTTCC CTTGCTAATG CTACACCTGC TCAACAGAGA ACACTTCTTG GTGAGAGTCT ATACCCATTA GTGGATCAGA TAGAGCATGA GAACGCTGCG AAAGTGACTG GTATGCTTCT AGAAATGGAT CAGACCGAGG TTTTGCATCT GCTCGAGTCA CCAGAGGCTC TAAATGCCAA AGTTTCAGAG GCATTGGATG TGTTGAGGAA TGTGAACCAG CCATCAACAC AGGTGAGTGA AGGCAACAAA AGTGGAAGCC CAAGTGATCT CATGGCTTCA CTTTCCATTA ATGATCACTT ATGAGAAGCT TTTGTTCGAG TTTT 
Length2014
Protein Sequence
Protein Residue
Map Locationscaffold_4: 1663771.. 1666610
Download Sequence
A.thaliana
AGI-codeAT2G23350.1
Descriptionpoly(A) binding protein 4
TAIR curator summarypolyadenylate-binding protein, putative / PABP, putative.Member of the Class II family of PABP proteins. Highly and ubiquitously expressed.
Alias[PAB4][PABP4][poly(A) binding protein 4][POLY(A) BINDING PROTEIN 4]
Gene coexpression
MR
MR Locus Description
4.24264 Ahg475376 Ribosomal protein S5 family protein
8.3666 Ahg482640 ribosomal protein L24
12.9615 Ahg496546 glutamate-1-semialdehyde-2,1-aminomutase
18.412 Ahg491830 HAD superfamily, subfamily IIIB acid phosphatase
18.5472 Ahg496177 GTP binding Elongation factor Tu family protein
22.1811 Ahg920787 Ribosomal protein L6 family protein
27.7128 Ahg939120 Ribosomal protein S13/S15
29.2916 Ahg934855 Uroporphyrinogen decarboxylase
31.305 Ahg473757 ribosomal protein 1
32.4037 Ahg482591 Ribosomal protein S11 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression