Detail



ID : Ahg933121

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933121|scaffold_401109.1
Sequence
GAAATTGCTT TCTAGTTTGT GATGGGTGGT CTGTCTATGG AGGAATTGCC TTTATCAGCG TTGTTCGAGC AAGCAAGGAA AATTCATCTC GCGGCTTCAG AGTCTGGTAC CGATCAGGAT GTTGTGAAGA AAGGATGTGA GATGTTTCAG AAATGCGAAG ACATGATCGG AAAATTGGGC TTGTTCTCTT CTAACGAGAC TAAAGAAGAT ATCAGCACGA ACAATCTCAA GTACCTTTTG GTGCCTTATT ATCTTGCGGA GTTGACGGAG AAAATCATAC AGGAGGACCG TATTCAGATT GTCAAGGCCT CATATGCAAA GTTGAAGGAG TTCTTTTCGT TCTGTGAGGC AATGGAACTT GTTCCAGATG AGGAGTTGGA GGCTTCTTCA CGAAGTTCTG GTGCACCTGC AGATCGAAGG GCTTTGAAGA TAGCTCGCTT CAAACGTCAA AAGGCTGCAG AGGCAAAGCT TCTTGAAATT AAAGAGAGAA AGGAGCGACG TGGACGTTCC ACTAAAGCAT CAGCTTTGTC GACTCCGGTT GAATCTGGAG AAGAAGATAT TCCAGATGAT GACAGCGAAG AAGAGAGAGA GGCCTGGCTC TCCTCAATTA ACTTGGCTAT TTGTAAGGCT ATTGATCTGT TGGAAATGCT AAAGAGAGAA GAGGAAATGC TCTCTGCAAT AAAGGAAAGA CAGTTGAAGG ATGGAGAGGA TGGGTTCTCT CGGGATGCTC TTGATGATCG TACAAAGAAA GCTGAAACCT GGCACAGAGA CGCTGCTGCA AGGATACAGT ACTCTAAACC GGCACAACCA ATCACTTGTG CCACATTTGC ACAAGATGTG TTAGAAGGAA GAGCTTCTGT ATCACAAGGT CACGACCACA AGAACCAACC TCTTATATTC GGTCCAGCAA GCATCGTGGG TGGACCGCTC TCTACCGAGA GAGAGAGGAT GATAGCTCAG GTTTTCCAAC CAAGTCACAG GATGCCAACA ATGTGCATAG AGGATGCTGG GTTAACAGAG ATGAACATAA TGAATGATTG GCAAGAGCAG ACGAAAAAAG CCATTGAAGA AGCAACGACC TCATGGTACA ATGATAAACC TCTGAGAAGA AAAGAAGAAG ACGAGGAAGA TGATGATGAA GACGAAGAAG CTGTAATGAA AGCTAGAGCT TTCGATGACT GGAAGGACGA TAATCCTCGT GGTGCAGGTA ACAAGAAACT CACACCTTGT GGCTGAGACT GAGACAGAGA GACACAT 
Length1257
Protein Sequence
Protein Residue
Map Locationscaffold_4: 10828776.. 10830870
Download Sequence
A.thaliana
AGI-codeAT5G53000.1
Description2A phosphatase associated protein of 46 kD
TAIR curator summaryPP2A-associated protein with a possible function in the chilling response
Alias[TAP46][2A phosphatase associated protein of 46 kD]
Gene coexpression
MR
MR Locus Description
3.87298 Ahg941131 Protein of unknown function, DUF538
4.89898 Ahg918883
4.89898 Ahg472194 RING/U-box superfamily protein
4.89898 Ahg477583 LUC7 related protein
7.34847 Ahg912447 Family of unknown function (DUF572)
8.48528 Ahg319882 RPM1 interacting protein 13
9.48683 Ahg484134 SNF2 domain-containing protein / helicase domain-containing protein
15.1987 Ahg481423 holocarboxylase synthase 1
16.9115 Ahg471075 Adenine nucleotide alpha hydrolases-like superfamily protein
16.9411 Ahg914631 indeterminate(ID)-domain 7
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression