Detail



ID : Ahg319882

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|319882|fgenesh1_pm.C_scaffold_3002898
Sequence
ATGGGTTCGG GAAATCATGT TGTTATCGTC GATGTTAGCT CAGACGAAGA GGAGGTTGAT ACACGGGTAG ACCTAGACTA CTCCAGTTGG CTCAATGATG TTATGGAACC CGTCGATGAT AAATCTGACA GTACCGATAT AGTCGAGGTG CTTTCTGAGG TTAAAGGTTG CGTAGATTCT CAGTATCGGA AGCCAAATTC GTCGATTCAA GCTGTTGACG ATGATGACGA TTGTGTGATT TTGGATTGTG ATCCCGATAA GTCGACGAAG ACTGCTTCAA TTGAAGACGA TGATGATGAT AAGTTAGCAA AGAATGACGA TGATGATGAT GATGATGATG ATGTGCTTGT AGTGGGTCAA AAGGGTGAGA TAGCATGTAG AGATTTCCCA CATCCTCGAC ATTCGTGTGC TAAGTATGCG TTTAACTCAA CATCACACGA GAAGTACTGT GACATGTGTC ACTGTTATGT GTGTGACATC CGTGCTCCAT GTCCATACTG GTGTATTGCT GTCTCCAGCA TAGATCATTG TCATGCTAAT GATAAAGAGA AGATATGGAA GAATCAACGT GAATACTTCA GGACGGGATA CATGCCTACC CCACCGACTT CGAAACCTAC TCCAAGTATC TTACGGGTGT CTAAAAACAC TTTGCTTCGG AACCCGGTTG AGATCCGGCG TTGTTCATCA TCTACCCGTG TTGCTAATCC CTCAAGCGTC AAAGCCAGGC ATAGAATCAG GCAACCGATC CCTCACAATC AAGGGTTGCA GAGTCAACCT GCGCAGTCAT TGAGCGGTGT TCGCAACAGC GTGATCCAAA AGGATAGAAG CTCTTATAAG TTTAGCCTAC GATCCCGAGT AGCCTCTTCT GCGGGAAATG GTAACAACAT CCGATATAGC AATGCTCAAG TTTCACAATC CAGCCACCAT AGCTCTTCCT TAGTGGCACC GACAAAAAAC CCGGAAATGT ACACTCAACA ACGCAATTAC CAGCCCAATG TTAGTGATCA TTGCACAGCG CTACCTGGTT CACAGAGCAA TATGTACACT CGACAGTCAG ACCAGAACAT ACGTGGTAGT GGAAATCGTC AGTTTCAGAC ACATGTGAAT CTGTTTGCTC CGTCGGAAGC TCCTCTTACT GCTGCAGATC CACAAACAGA GACGGTACAA CAGCAACTAG GGACAAATGA AAACGTCTTG GAGACCAAAC TATCGGAATT TGAGAACTGG CTAATGGAAA ATCCTAACCA AACCGGCGCG GTTAGTCCGT TGCCCGAACC GGTAGGTGAA GACTATGTTG ATACGTTGTT ATTTGATTTC GAAACCTTCT TGAATGATTA G 
Length1341
Protein Sequence
Protein Residue
Map Locationscaffold_3: 22429642.. 22431358
Download Sequence
A.thaliana
AGI-codeAT2G20310.1
DescriptionRPM1 interacting protein 13
TAIR curator summaryEncodes RPM1 Interacting Protein 13 (RIN13), a resistance protein interactor shown to positively enhance resistance function of RPM1.
Alias[RIN13][RPM1 interacting protein 13]
Gene coexpression
MR
MR Locus Description
3.31662 Ahg470965 zinc ion binding;zinc ion binding
7.93725 Ahg472173 3-ketoacyl-CoA synthase 4
8.48528 Ahg933121 2A phosphatase associated protein of 46 kD
10.583 Ahg950332 profilin 3
12.9615 Ahg489753 Protein of unknown function (DUF1644)
13.4164 Ahg493270 associated molecule with the SH3 domain of STAM 3
15.0333 Ahg496934 Protein of unknown function (DUF677)
18.9737 Ahg494671 casein kinase I-like 8
19.7484 Ahg479641 RNA-binding (RRM/RBD/RNP motifs) family protein
22.1811 Ahg485584 Dihydrolipoamide acetyltransferase, long form protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression