Detail



ID : Ahg933324

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933324|scaffold_401312.1
Sequence
AAGAAGAAGA AAAAAAGGAA TAGTTATGGA TCTTCTCTTT CTCTTTTTCT CTCTTCTCCT CTCTTACCTC TTTTTCAAGA TCTGGAAACT CATAGACTCA AAGAAAGATA AAGATTGCTA CATTTTAGAC TACCAATGTC ATAAACCTTC TGATGATCGA ATGGTGAGCA CTCAATTCAG CGGAGAGATC ATTTACCGAA ACCAAAACCT TGGCTTAACC GAATACAAGT TCCTTCTCAA AGCAATAGTA AGCTCAGGGA TTGGAGAACA AACCTACGCT CCAAGACTTG TCTTTGAAGG TCGAGAAGAG CGTGCTTCGT TACAAGACGG GATCTCGGAG ATGGAAGAGT TCTACGTAGA CAGCATCGGA AAACTCCTGG AGAGAAATCA AATTTCTCCT CAAGACATAG ACATCCTCGT AGTCAACGTC TCCATGCTCT CTTCAACACC TTCTTTAGCT TCAAGAATCA TAAACCATTA CAAGATGAGA GACGACGTCA AAGTCTTCAA CTTAACCGGG ATGGGATGCA GCGCAAGTCT AATCTCCGTA GACATTGTCA AGAACATCTT TAAGAGCTAC GCAAACAAGT TAGCTCTTGT TGCTACCTCC GAGTCTTTGA GCCCTAATTG GTATAGCGGA AACAACCGGT CGATGATCTT AGCCAACTGT TTGTTCCGGT CCGGTGGATG TGCTATTCTC TTGACTAACA AACGTAGCTT GAAGAAGAAT GCAATGTTTA AGCTCAAGTG TATGGTACGG ACTCACCATG GAGCTAGAGA GGAGTCTTAT AATTGTTGTA TCCAAGCCGA AGACGAACAA GGCCGTGTCG GGTTTTACTT AGGGAAGAAT CTACCAAAAG CTGCCACTCG TGCTTTTGTA GACAACCTCA AGGTTATAAC ACCCAAGATT CTTCCTATAA CCGAGCTTTT AAGGTTCATG TTAAAGCTTC TCATCAAGAA AATCAAGATT CGTCAAAACC CTAGCAAGGG TTCCACGAAT CTCCCACCGG GGACTCCTTT AAAGGCAGGA ATCAACTTCA AGACCGGGAT CGAACATTTT TGCATTCATA CCGGAGGAAA AGCTGTGATT GATGGGATTG GACATAGCTT GGATTTAAAC GAGTATGATA TTGAACCGGC GAGGATGACT CTTCACCGGT TTGGGAATAC TTCAGCGAGT AGTTTGTGGT ATGTGTTGGC TTACATGGAG GCCAAGAAGA GATTGAAGAG AGGAGATAGA GTGTTTATGA TAAGCTTTGG AGCTGGTTTT AAGTGTAATA GCTGCGTTTG GGAAGTTGTG AGAGATCTTA CTGTTGGTGA ATCAAAAGGA AATGTGTGGA ATCATTGCAT TGATGATTAT CCACCAAAAT CGATTTTGAA TCCTTATTTG GAGAAGTTTG GTTGGATTCA AGATGAAGAT CCTGACACTT TCAAGGTCCC TGACGCTTTC ATGTAAAACG TTTTGGCACA AAAACG 
Length1476
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12255869.. 12257348
Download Sequence
A.thaliana
AGI-codeAT2G28630.1
Description3-ketoacyl-CoA synthase 12
TAIR curator summaryEncodes KCS12, a member of the 3-ketoacyl-CoA synthase family involved in the biosynthesis of VLCFA (very long chain fatty acids).
Alias[KCS12][3-ketoacyl-CoA synthase 12]
Gene coexpression
MR
MR Locus Description
10.3441 Ahg482620
17.1172 Ahg948737 HAD superfamily, subfamily IIIB acid phosphatase
17.6068 Ahg934869 expansin A8
18.7083 Ahg490251 RNA-binding protein-defense related 1
23.7697 Ahg917292 Leucine-rich receptor-like protein kinase family protein
24.9199 Ahg480130 CCCH-type zinc fingerfamily protein with RNA-binding domain
31.8904 Ahg950113 zinc finger protein-related
35.0428 Ahg914843 Protein kinase superfamily protein
38.6911 Ahg923183 receptor-like kinase 1
39.4968 Ahg496184
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression