Detail


ID : Ahg933368

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933368|scaffold_401356.1
Sequence
ATGCAATTTA GGAGGAATCA ATGAAAGGAC ATCAATTAAA ATCCTGGATT TTTGAATTGA GAGAAATAGT GAGAGAGATC AAGAATTCTC ACTATTTCTT AGATTCATGG ACCCAATTCA ATTCAGTGGG ATCTTTCCTT CATATTTTTT TCCAGCAAGA ACGTTTTAGA AAACTCTTGG ACCCTCGAAT TTTTAGTATC CTACTTTTGC GCAATTCACA GGGTTCAACA AGCAATCGAT ATTTCACGAT CAAGGGTGTA GTACTATTTG TAGTAGCGGC CCTTCTATAT CGTATTAACA ATCGAAATAT GGTCGAAAGC AAAAATCTCT ATTTGAAAGG GCTTCTTCCT ATACCTATGA ATTCCATTGG ACCCAGAAAT GATACATCGG AAGAATCTTT TGGGTCTTGC AATATCAATA GGTTGATTGT TTCGCTCCCG TATCTTACAA AAGGAAAAAA GATCTCTGAG AGTTGTTTCC GGGATCCGAA AGAGAGTACT TGGGTTCTCC CAATAACTCA AAAGTGTATC ATGCCTGAAT CTAACTGGAG TTCGCGGTGG TGGAGGAACT GGATCGGAAA AAAGAGGGAT TTTTGTTGTA AGATATCTAA TGAAACCGTC ACTGGAATTG ATATCTCATT TAAAGAGAAA GATATCAAAT ATCTGGAGTT TCTTTTTGTA TATTATATGG ATGATCCGAT CCGCAAGGGC CATGATTGGG AATTGTTTGA TCGTCTTTCT CCGAGTAAGA GGCGAAACAT AATCAACTTG AATTCGGGAC AGCTATTCGA AATCTTAGTG AAAGACTGGA TTTGTTATTT CATGTTTGCT TTTCGTGAAA AAATACCAAT TGAATTGGAG GGTTTCTTCA AACAACAACG AGCTGGGTCA ACTATTCAAT CAAATGATAT TGAGCATGTT TCTCATCTCT TCTCGAGAAA CAAGTGGACT ATTTCTTTGC AAAATTGTGC TCAATTTCAT ATGTGGCAAT TCCACCAAGA TCTCTTCGTT AGTTGGGGGA AGAATCCGCA CGAATCGGAT TTTTTTAGGA AATTATCGAG AGAGAATTGG ATTTGGTTAG ACAATGTGTG GTTGGTAAAC AAGGATAGAT TTTTTAGCAA GGTACGAAAC GTATCGTCAA ATATTCAATA TGATTCTACA AGATCTAGTT TCGTTCAAGT AACGGATTCT AGCCAATTGA ACGGATCTTC TGATCAATTC ATAGATCCTT TCGATTCCAT TAGTAATGAG GATTCGGAAT ATCACTATCA CACATTGATC AATCAAAGAG AGATTCAACA ACTAAAAGAA AGATCGATTC TTTTGGATCC TTCCTTTATT CAAACGGAAG GAAGAGAGAT AGAATCAGAC CGATTCCCTA AATACCTTTC TGGATATTCC TCAATGCCCC CTACTCACGG AACGTGAGAA GCGAATGAAT AATCATCT
Length1448
Protein Sequence
Protein Residue
Map Locationscaffold_4: 12564047.. 12565494
Download Sequence
A.thaliana
AGI-codeATCG01280.1
DescriptionChloroplast Ycf2;ATPase, AAA type, core
TAIR curator summaryhypothetical protein
Alias[YCF2.2]
Gene coexpression
MR
MR Locus Description
5.19615 Virus0033
36.8646 Ahg947113
40.7922 Ahg346340 Leucine-rich repeat protein kinase family protein
58.6856 Ahg915170
59.3801 Ahg938332 F-box family protein
59.7997 Ahg475585 ribosomal protein S16
61.1392 Virus3423
72.1249 Ahg947868
81.6945 Ahg888260
90.0666 Ahg350576 Mitochondrial ribosomal protein L37
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression