Detail



ID : Virus0033

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionCitrus_endogenous_pararetrovirus|vertebrates|Retro-transcribing
Sequence
TGGTATCAGA GCCATACCGT TCCTTGAAAC TTGTTTTCTA AATTCTTGTT TTCATGCTCA AAATGGTATA ATTTATGACT TTATTCTGTT TTGATCATTA GACTTCAGAC GCAGAGAGAG TTTCTCATTC ATGGCTTCCA CTTCCTCTTC GAATCTTTCA ACTCCTCTTA CTCTTTCTTC TACTCTTTCC TTGCCGAAAT CTTGCACTTC TCATACTGCC AATAAAATTG AAAATCTTGT AGAATACTCC TACATCCCTG AATCCGCCCA AATCAGTGAA TCCACCTACC CTCTTATTAG CCCTTACCAT TTGTACAAAC GACCCAACTC CTTTACCCGC AGCATCCGTA CCCTTATCTC TACTAAACGG CCACACCCTA AAGAATATAT CCAGTCTTCT CGTCTGGATC AATGTGCTCT TAAAGCCACC TCTGCTGAGC AATATGTCAC ACTGGAAATT CCTTCAGAGC TCATTTCAAA TTGGAAACGT GAAGGATACA CTCATCTTCA TCTAGGCGGC ATCCGGCTCA TCCTAACCCT ACATGGGCGC AAAGGTTTAC CTGTTACCGC TCGTGTTGCT CTCCTAGACA CTCGGTTTAA ACAGTTCCAA GATGCTGTTA TCGGTACTGT CCTCACCACC CTACATGCTG GCAGTGTCTT ACTCACCTTT TATCCCAACT TCAATCTTTC TCTTCAAGAT CCAAATCTAC CTACAACCCT GAAAGTCCAA GTCCAGATCC AAGGTGCTGA ACAAATCTCC ACTGCTAAAA TCGCCACCTT ACACCATCAA TTGGTCTATC GGCTTCAGAA TCATGCCTTA GACCTACCCA CTCCAGAACA CCACTCTGAC ACTCTCATGG TGTTAGCTGA ATCTGACCAA ATTCCAACCA TCATTCAGAT CCCCAGGCAA ATTCCTCGGC ACGAACTCCT TAAGCTTATG CCTCTTGAAT GGATCTCAAA CTATGAGCAG TTCCATAACA ATACAGCCCC AGTTCAGACA TCTGAAAGTA TGTTTGAAAG GCGACCCGAT GGCACGGTCA GAATGACCTT TAAACCACCT CCCAGTGCTC CTCAAGAGCC TCCTCGGCTC TCTTTCACTT ATTCCTCCAT GATCACAGCT GTACAGACAG CTCAAGAAAA TTTGCCTATT ACAGGGTTCA CTTCCAACGG TTTCCCTGTT TATCCAGCCA AGCAGAATGG ACATTTCCTT TGGGATGTCC CTGGTTCCGG CCACTGTGAC CCAGATTGTC CCTGCTGGGA TGATTGGGAA GAGGATAACG ATTATGTAAC CAAAAAGAAA AAGAAACCTA AGAAAAAATC TCATGCCTCG TGTCACCACA GTACTTCTAG ACCACCACAA GATCCTCCTC CTCCATCAGC TCCTTTACAT CTCTATAAAA AGGAACTCCA ATGGCTTGCA AAGCGTTGCA CCTCTACAAT CTCCTCACCT GTTCCAGATC CATCTCCACC TCTGAGTTGT ATGATGTTTT CATCTGCTTC CTCAGATTAT TCTTCCTATT TTCCTCCTTT AGACACCCAC ACAGATTCCC AACGAAATGT TGTGTCCAAA CCTTTTATTC CATCACCCAT AACCTCAGCC GGTCATCTTG AACCACCCAA ACCTTTTGAA TCAGTCCTCA ACTGGCAAAC TCAAAATGCC AGAGCCCAGA ATGATACTTT GTTGAACATA AATTCCAAAG TTGAAAAAAT CAGTTTACGA ACTGAACACC TTGAAACGAA GGTTGACTCC ATCTCTGCAC AACTGCAGCA GATCCACCAG AACCTCCAGT CCAGAATTGC TCAACTTGAC TCTGAGTTGC GAACTATGCT TGCCCAACGT TACCATGGCC CAGAATTTGA TCAAAAAGAA AGGGAGATCA GACATTTAAA AGCTGAGCTT GCTCAAATTG AATCTGACAA ACAAAAACCT TCCCTTTTTA CCTCCTCACC TCCTATCCCT TCGATTGGTC CAACTTACCA TCCATTTGCT TCTATGCTTT CTCTTATCCG ACAGTATGAG CCTTCTAAGC TGTTTGGTAT GACTCATACC CTTTTCCGAG ATAACCCATT ACCACCACCA CCTAAATCTA AACCAAAGCC TAAACCTCAA CCACGACCCG TCACAATCAA TCCTTCATCC ACTATTATCC CTTACCAACA ATCACCGGGC TATACACCAG CATCACCATC ACCACCTGAA CCATCCAAAT CCCAACCTCC TACCGCATCC AAGGATAAAG AACCTATGCA CCAATTCAGT GCCCATACCA TTGACCACCC ATCTTCCACT GATGACCAAA CTTCTGATTC AAATCTAGCC GTTTCAGATA GCCATACTGA GATTGACACG GAATCTTCAG CATCCACCAG TGACTCTGAA AAATCTTATG CTGATATCAC CAGAATCCTG ATGGCTCAAC CTGACCCACA AACCTCTCGG ACTGAACCAT ATGTTAATAT TCCCTCTGAT GTTGAAGAAG AGATGCCTGA ATCTTCTGCT ACCAACCAGC CTCCTCCGGC CCAAACTACT TCATCGAGTC AAAAATCATC AAATGGTCCC TGGTTTACCT ATGATGATAT CCCATCCTAT AAATGGCGTG ATCGTCTTAA TGAAATGTCT GCCTGGATTG ATCTCCAAAT GCTCAGATCA GGAGCCACTA CTGAATCAGT CCTTAGAGAA TTTGCTACTC GTTTTACGGG TGCTCTAAGA GATTGGTTTG ACTCTCTTGG TCCATACAGA CAATTGCAGT TTGTTCAATT ACCAGAAGTC TCCAGTGCTC TTGCCATTCT CCATGATCAG TTTTTAGGAG ACCCAGCTGC AGCCTTTGAA GCTGCACGCC GAGACTATCT TAGCATGAAA TGTTGCTCCC TTGATGCTAA GGATCTTGAT TTCCATTACA AGCGCATGTC CCTGTTATTC TATAAGCTTA ATGGATTCAA CGAGCCTACC CTAAAGCATG TCTTCCTGGC TTCCCTTCCA GAAGAACTCC AACCAGACAT CCAGCGGCAG CTCACCGCCT CCAATCTTGT CATTGACAAT ATCTCTCTTG GTAAAATCTT CCAACTTGCC AAAACTTGTC TTGACAAGCT CTGTGAACAG AAACAGTTCT TCAAGGACTT GTTGAAAGAC AAAGAACCAT TCAGAAGTGC TTGCAAAAAG CCTTATCTGC AGATCAAATG CAAACAAAAG AAGGATTGTG ATTGCAGCCC CAAAAAGAAA AGGCATTTTC GAAAGTTCAA ATCTCCAGAA TTCTCATCCA GACCCCGCAG GTCCAGAAAA CCTTACAGAT TTTTCAGAAA GCGGTCTTCT TCTTCCAAAG ACTCCAAACG AAGAAAATCC AGCAGATGTT TTATCTGCAG GAAAAAGGGT CATTTTGCCA AAGATTGTCC CAACAAAAGA GCCAAGTCCA TTCGTCTTGT AGAACATCTT CAGGCTACTA CAGATTACTC TCCTCAACAG GATGAACTGG AATTCTACTT CTCTGAACAA GATGAACCCA ATGATGAAAC AGTGTTCGCA CTCCAACAAT CTTCTGATGA TTCCGACAGT GATCAGTCCC AAGTCATTTT CCATCAACAG CTCTTGTCCC TTGATACTAC AGTTCCTATA CCTTCCATCA AACTCCAAAT CCTGCCATCA AAATTCCAAA GGCCCATTCC AGCAATTGGT CTTATCGATA CTGGTGCACA GCGCAGTATG ATAAACCCTC ATATTCTCCC ACCAGACTCC TGGACCCAAT CTGAAGAACA TTTCAAAGCT GTTAATGGCA AACTGTTCAC CACCTCTTTG ATTACCAAAA AACCCATTGG TATCCAGATT TTCCCTAATT GTGTCATTTG GACCAAAGTC ATTGGTTCAA CTCTTCCTAA TAAAGATATT TTGTTAGGAT TTGACATCCT TCACCAGATC AAACACCTTC AAATCATTCC TCATGGAATT CGAGTCAAGT CTATGTTCAA ACCATTCACA GATGTCTTGA AACTTTACAA TCTGTCTGAA ACCCCTCCAT CATATCAGGA TGTTTCTACC AAGCTTTTAA GTTTCTGTCC AGAGTCTCAT TCTGAGTTCA CCCATCCAAA TCCTTTGTGG AAAAATCAGT CTTTCTTTGT TAAGTTACCC TTCAAACTTA ATGAAGACAT CAATCCCACC AAAGCTACTC ATCCAGGAAT GAGTCCATCT GACTTACTCC TAGCCCAACA AGAATGTTCT CAACTGTTAG CCCAAGGGTT AATTGAGCCC ACAACCTCTC AATGGGCTTG CCAAGCCTTT TATGTTGAAA AGCATTCTGA AATTGTTCGA GGAAAGAAAC GCTTAGTCAT TGACTACCAG CCCTTAAACA TGTTTTTGCA AGATGACAAA TTTCCTTTAC CTCGCCGACA AAGCATGTTT ACTTTTCTCA AAAATGCCCA GATCTTTTCA AAATTTGATT TAAAATCAGG TTTTTGGCAA TTAGGCATTG AACCCTCTGA ACGATATAAG ACAGCCTTTT GTATTCCCAA TGCCCATTTC CAATGGACGG TCCTACCCTT TGGTCTCAAA ACTGCCCCAT CCATTTTCCA AAAATCCATG ATCAAAATCT TTCAGCCTCT CCTGTCTAAT GCCTTGATTT ACATTGATGA TATTTTACTT TTTTCAGGAT CACATGATGA CCATCACCGA CTGCTCAATC AGTTCTATGA TATTGTCCAC AGTCATGGAA TCATGCTATC TGCCAAGAAA AGTACCATTG CCACAGACAC CATCGAATTT CTTGGTATGA TCATAAAAGA TGGCCATTAC CAGCCAGGAA AGCACGTTGC CCAAGAGTTG CTTCACTTTC CAGATCAGCA ACTTTCCAAA AAGCAGGTCC AGCAATTTCT TGGAATTATC AATTACATCA GAGACTTTAT CCCACATGTG GACCACTACA CTCGTCACCT CTCGGCTTTA TTGAAGAAAA AGCCTCCTGA GTGGAATGAT GACCACACAA ACGCTGTCAC TACTCTCAAG AAGATTGCGC AAAATCCGCC CCCAAAACAC CAAACACACC CAACAAAGAA AATACTTCAA ACTGATGCCA GTGATCAGTA TTGGAGCGCT GTACTATTGG AAGAACATAA TGGCAAACGT CATTTCTGTG CACATGCAAG CGGACAATTC AAACACTCTG AAAAGAACTA CCATGTGATC TACAAAGAAA TCTTGACAGT CAAGTATGGA ATTAAAAAAT TCGAATTTCA TCTAATCAGC CACACATTTC TTATCAACAT GGATAATTCT TCTTTTCCCC GAATCTTTGA CTTCAAAAAC AAGTTGCTCC TTGATAAGCA ACTACTCAAT CTCAAAACCT GGTTTGCTAA GTATGACTTC ACTGTTCAAC ACATAAAAGG CAACCAAAAC CTCATTCCAG ACTTCCTCAC ACGTCCAGCT ATAAATAAAC CCTCACTCAT TTCCTCAATC CAAACCATTC CAGTCATAGC TCTGAATCGC CAACTTCCTT TCAAAGCTCT CACCCAGAGA CACTTTCCCA TGAACATCTC TTTCCAATCG GCTTACCAGC TGCAGGATTT TACAAAGAAA TTCCTTTAAT GTTCAAACCA AAAAACCCGA CCATTTTCCT AATCTTTGCA TGGAACACCT GTTTCTCACA GGCCTTATTC TCTCCTCTCT GTCCATCTGT GAAGATGAAC TTTGGTACAT GTGGTGTCTC ACCGCCTTGT ATGCTACAGA GTTGGTTCTT CCCATCAAAC CAGGCCTAAT CACCTTACCA CTCCTGAGTT CTCACCAAAC CCCCTATGGA CTCTCCTTGA ATAGTATTCC CCACTCACTT GGTAGCGTAA ACAACTCCAA CAGTTGATTA CTTTTCATGG ATTAGACAAA ATACTAGAAC AAGAAGCTAA CATGTGGACT ACAGTCTTCA TTGTCCACAG GCCTTACTTC CAGCACCCAG AAACGCGGGA CTACTGGACA CAAGACATGG CATACGAATG AAGAACTTAT CCTCATCCAT ATACCCTCAT TCATGACACA TCTGTTACTT CTGTTCTCAA AGCCTACCTT ATGGAACTAA ATAATGTTCC TTCCCCAGCC ACAGACATTC ACCACACCTC TATTGGACCC TCACACACTC TTGAAATCAT TCCCAAAACA CAAGGTTGTA CTCCAGGTTC AAGTTCAAGC CCTCAAGGTA TCCTTGTCAC GGAACAACGT CCTGACTACA CCAATATTTT ATTCCAAGAT GCTCAGGATC CATGGGAAGA CTTTCAGTCC CTTCTCCATA CTGAAAATCC CCGTTATACT GTCACCACTC CAGACTCTCC TGCTGCATCT ACATCTCAGC ACATGACTGA AGCTGATGAA AACAAATACC AACAAGCAGA GGTATCCCTC GACCAACGAC AAATCCGTCG ACACAAACGA CAATATGGAA AAGACACAGG AGACGTGTCA CCATCTCGTT ATCCATCCAC TCCATGATAA CGACTTATGC ACAAACTTTT GATACACCTA TCCATGTGAC TCCCGTTTGT CTTTTGTTAA AGTCCTTGTC GGTGTGCTTT ACTTTTGTTA AAGTCCTTGT CGGTGTGCTT TACTTTTGTT AAAGTCCTTG TCGGTGTGCT TTACTTTTGT TAAAATCCTT GTCGGTGTGC TTTACTTTTG TTAAAATCCT TGTCGGTGTG CTTTACTTTT GTAAATGTCT TTATTGGTGT GCTTTGCTTT AGAATCATTC GAGAGGTCCT GTTCTCAATG ATTTTCTATA AATAGCACCT TCAGCTTTAG TTGAGGGGGG CTCATCAAGA AATAAACAAT CCAGTTCTAT ACATTATGTT TCCCTAAAAC TCTCTCTCTC TTCTAGGAAT CAAAGCAATT ATTTAGATTA ATAATGATAC GCTCACCTCC TGAGTATGCT TTGCTCTTGC CTTAAGCCTA AGGATCCTGT GCTTGCGGAC TACTGGTCCA AAGTACAGTT TTAACTGTTG TAGTTCTGGT ATAACAACGC CACGTACACT CTTAAC 
Length6996
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
3.87298 Ahg947113
5.19615 Ahg933368 Chloroplast Ycf2;ATPase, AAA type, core
9.32738 Virus3423
11.6619 Virus2146
11.6619 Virus0931
11.6619 Ahg906174
11.6619 Virus0411
12.49 Ahg952365
13.9642 Ahg322683 Defensin-like (DEFL) family protein
16.4924 Ahg344503
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression