Detail



ID : Ahg933464

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|933464|scaffold_401452.1
Sequence
GATCTCCAAG GAAAAGAACA ATGGCTGGTG GACTTGCACT GAGAGATGGC ACTCAGCTGG AACTTCCGTG TCAGTCAAGG ACTGGAGGCC CATTCGGAAC AATGAGGTTT GATGCTGAGC AAGCTCATGG AGCCAACAGT GGTATCCACA TTGCTCTTAG GTTGTTTGAC CCCATCAGGG AGCAATTCCC TACTATCTCT TTTCTTGCTG AGGTTGTGGC TGTTGAAGTT ACTGGTGGCC CTGAAATTCC TTTCTACCCT GGAAGAGAGG ACAAGCCCCA GCCACCTCCA GAGGGTCGTC TTCCTGATGC TACAAAGACT TTTGATCACT AGAGAGATGT CTTTGCTAAG CA 
Length352
Protein Sequence
Protein Residue
Map Locationscaffold_4: 13062757.. 13063648
Download Sequence
A.thaliana
AGI-codeAT1G07890.3
Descriptionascorbate peroxidase 1
TAIR curator summaryEncodes a cytosolic ascorbate peroxidase APX1. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms. At least part of the induction of heat shock proteins during light stress in Arabidopsis is mediated by H2O2 that is scavenged by APX1. Expression of the gene is downregulated in the presence of paraquat, an inducer of photoxidative stress.
Alias[APX1][ATAPX01][ATAPX1][CS1][MEE6][ascorbate peroxidase 1][maternal effect embryo arrest 6]
Gene coexpression
MR
MR Locus Description
6.63325 Ahg326708 Ras-related small GTP-binding family protein
11.6619 Virus0316
11.6619 Virus3474
13.3417 Ahg945478 Protein of unknown function (DUF630 and DUF632)
20.3224 Ahg927734 ROTUNDIFOLIA like 19
30.1993 Virus3754
31.749 Ahg330732 Plant invertase/pectin methylesterase inhibitor superfamily protein
33.0908 Ahg486590 low-molecular-weight cysteine-rich 8
33.4664 Virus2149
37.8153 Ahg336537
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression