Detail



ID : Ahg935323

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|935323|scaffold_403311.1
Sequence
ACAAATCCGA CGAGCGAAAC ATGAAGTCAT TAGCTTCGCC GCCGTGTCTC CGCCTGATAC CGACGGCCCA CCGTCAGCTC AATTCGCGTC AATCTTCCTC AGCCTGTTAT ATTCACGGTG GCTCTTCTGT GAACAAATCC AATAACCTCT CATTCTCCTC ATCCACATCC GGATTTGCGT CACCACTCGC TGTAGAGAAG GAATTACGCT CTTCATTCGT ACAGACGGCT GCTGTTCGCC ATGTTACTGG GTCTCTTATC AGAGGCGAAG GTCTTAGATT CGCCATCGTT GTAGCTCGTT TCAATGAGGT TGTGACTAAG TTGCTATTGG AAGGAGCGAT TGAGACTTTC AAGAAGTATT CAGTCAGAGA AGAAGACATT GAAGTTATAT GGGTTCCTGG CAGCTTTGAG ATTGGTGTTG TTGCACAAAA TCTTGGGAAA TCGGGAAAAT TTCATGCTGT TTTATGTATC GGCGCTGTGA TAAGAGGAGA TACCACGCAT TATGATGCTG TTGCCAACTC TGCTGCGTCT GGAGTACTTT CTGCTAGCAT AAATTCAGGC GTTCCATGCA TATTTGGTGT ACTGACTTGC GAGGACATGG ATCAGGCTTT AAATCGATCT GGTGGCAAAG CCGGCAATAA GGGAGCTGAA ACTGCTTTGA CGGCGCTCGA AATGGCGTCG TTGTTTGAGC ACCACCTGAA ATAGCTCTGC TGGTTCCATG GATG 
Length724
Protein Sequence
Protein Residue
Map Locationscaffold_4: 20396418.. 20398017
Download Sequence
A.thaliana
AGI-codeAT2G44050.1
Description6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase
TAIR curator summary6,7-dimethyl-8-ribityllumazine synthase / DMRL synthase / lumazine synthase / riboflavin synthase [Arabidopsis thaliana]. Acts in the jasmonic acid signaling pathway.
Alias[COS1][COS1][COI1 SUPPRESSOR1][coronatine insensitive1 suppressor]
Gene coexpression
MR
MR Locus Description
12.2474 Ahg492293 Double Clp-N motif protein
16.3401 Ahg473693 Ribosomal protein L21
19.7484 Ahg478856 Pyridoxal-dependent decarboxylase family protein
27.4226 Ahg941132 chloroplastic acetylcoenzyme A carboxylase 1
27.8747 Ahg945574 DNA-binding storekeeper protein-related transcriptional regulator
32.218 Ahg477028 Ribosomal protein L13 family protein
34.2929 Ahg937391 translocon at the outer envelope membrane of chloroplasts 75-III
44.0341 Ahg494502 organellar single-stranded DNA binding protein 3
45.607 Ahg942428 Ribosomal protein S24e family protein
45.607 Ahg494259 Ribosomal protein L19 family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression