Detail



ID : Ahg937199

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937199|scaffold_501390.1
Sequence
AACTTACCGG TAATATCGAA GATGCAGAGG TTTTTCTCCG CCAAATCGAT TCTCGGTTAC GTCGTCAAGA CGCGGAGGAG GTCGTTCTCT TCTCGTTCTT CGTGTCTCCT ATTCGACGAC ACTCAGTTAC AGTTTAAAGA AAGTGTATCA AAGTTTGCGC AAGATATTAT CGCTCCTCAT GCAGAAAGAA TTGATAAAAC TAATTCATTT CCAAAGGATG TAAACTTATG GAAGCAAATG GGGGAGTTTA ATCTCCATGG AATCACTGCA CCAGAGGAAT ATGGAGGTCT AGGTCTTGGT TACTTGTATC ATTGTATAGC AATGGAGGAA ATCAGTCGGG CCTCGGGGTC AGTTGCTCTG TCTTATGGTG CTCATTCCAA CCTTTGCATC AATCAATTGG TGAGGAATGG AACTGCAGCC CAAAAGCAAA AGTATTTGCC AAAGCTTATC AGTGGAGAGC ATGTTGGTGC TCTTGCAATG AGTGAACCCA ATGCCGGTTC AGATGTTGTC GGCATGAAAT GCAAGGCTGA GAAAGTAGAT GGTGGTTATA TACTAAATGG CAACAAGATG TGGTGCACTA ATGGTCCGTC TGCTGAAACA CTGGTTGTTT ACGCGAAAAC TGATACAAAA GCAGGTTCTA AAGGAATCAC GGCTTTCATT ATAGAGAAGG GAATGACCGG ATTCAGTACT GCTCAGAAAT TGGACAAACT GGGAATGCGG GGAAGCGATA CGTGTGAGCT TGTTTTTGAG AATTGCTTTG TTCCAGAAGA AAACATTCTT GACAAGGAAG GAAAAGGAGT GTATGTTCTG ATGTCAGGTC TGGATTTGGA GAGACTTGTT TTATCAGCTG GGCCCTTAGG GATCATGCAG GCATGCCTCG ACACCGTACT TCCCTATATT CGCCAGAGAG AACAATTTGG TCGTCCAGTT GGAGAATTTC AGTTTATACA GGGTAAAGTT GCGGATATGT ACACTGCATT ACAATCTTCA AGGTCATACG TCTACTCTGT TGCGAGGGAC TGTGACAATG GGAAAGTTGA CCCAAAGGAC TGCGCTGGAA CTATTCTATG TGCGGCCGAG AGAGCAACGC AAGTCGCTTT ACAGGCAATA CAATGTTTAG GCGGAAATGG GTACATAAAC GAATATGCAA CAGGACGCCT TCTAAGAGAT GCGAAACTAT ATGAAATCGG AGCGGGGACA AGCGAGATCA GAAGGATTGT CATCGGTCGC GAGCTTTTCA AAGAACAATA GAGATAAGTC TGTTTTCTGC T 
Length1271
Protein Sequence
Protein Residue
Map Locationscaffold_5: 11346690.. 11349788
Download Sequence
A.thaliana
AGI-codeAT3G45300.1
Descriptionisovaleryl-CoA-dehydrogenase
TAIR curator summaryEncodes isovaleryl-coenzyme a dehydrogenase. Mutants have increases in 12 seed free amino acids, accumulation of seed homomethionine and 3-isovaleroyloxypropyl-glucosinolate, with a concomitant decrease in seed 3-benzoyloxypropyl-glucosinolate.
Alias[ATIVD][IVD][IVDH][isovaleryl-CoA-dehydrogenase][ISOVALERYL-COA-DEHYDROGENASE]
Gene coexpression
MR
MR Locus Description
15.3948 Ahg480564 GCIP-interacting family protein
20 Ahg933869 centromere/kinetochore protein, putative (ZW10)
24.454 Ahg496364 Arabidopsis thaliana protein of unknown function (DUF794)
24.7992 Ahg328571 SDA1 family protein
25.5147 Ahg920616
32.7567 Ahg483994
35.7911 Ahg345267 helicase domain-containing protein
37.9737 Ahg489545
41.2432 Ahg470832 RNAligase
47.3709 Ahg940427 LisH/CRA/RING-U-box domains-containing protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression