Detail



ID : Ahg937426

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937426|scaffold_501617.1
Sequence
TCTTCAATTC GATTCTTCAC ACGAATGAAG AAGACACAAA TTGGAGCTTC ACTGAATCGA TATGGTGCTG ATGGAAGCCA AGCACATAAA TATTCATATC AATACTCAAC TGGGTCTGAC AGTGCTCCAT GGACAGCGCA TTCTGTTGAA AATCAGGCTG TGGAGAATGG GAACTATTCA AATTCAAACT ATTACCATCC GCAGCCCACG GGGCCAGCCA CAGGAAATGT GCAAGAAATA CCGAATACTG CATCCTTCAC TAGCTCATCG ACGTCTGGAA CTACAAATGT GGCACAAGAG TATAGTGGAT ATACGCCATA CCTGACCTCT TCTGACCCAC ACAATTATTC AAACACGGGA TATTCCAATT ACTACAGTGG TTATCAACAG CAACCTAGCC AGTCATATCC TCAGCCTGTA GGGGCTTATC AAAACACAGG TGCTCCTCAG CCTCTTTCCT CATTTCAGAA TCCAGGATCT TATGCTGGGA CTGCAAGTTA TTCAGGAACT TACTACAATC CTGCTGATTA TCAGACTGCT GGAGGTTACC AAAGTACAAA TTATAACAAC CAAACGGCTG GAAGTTACCC AAGTACAAAT TACAGCAATC AGACTTCTGC TTCGAACCAG GGAAACTATA CGGATTACAC CTCAAACCCT TATCAAAATT ATACTCCTGA CGCTAACTAC CAACAATGGT CAGCATATTA CAGCCAAACA GAAGTCCCCT GTGCCCCAGG CACCGAAAAG CTGTCTACCA CAACCACAAG TGCATATAGT CAGAGCTTTC CAGTTCCTGG TGTTACTAGT GAAATGCCTG CTTCAAATAG TCACCCTGCC CCGTCTTATG TCCAACCTTG GAGGCCGGAA ACTGACACAT CCCATCCACC TTCTCAGCAG CCTGGTGCAG CTGTTAGTAC ATCTAATGAT GCTTACTGGA TGCATCAAGC ACCAAGTCTG CAAGCTCATC ATCCTGTTCC ACCTCAAAAT CATTACCAGA GTCCTCTGGA GACAAAACCT TTATACGAGC CCCCCTTTCA GGGTCATCAG AGAGCTACAT ATCCTCAAGA GATGAAATCC CAGTCTTCCT TTCACCAGGC ACCTTTAGGC TATCGCCAGC CTACTCAGAC AGCACCGTCA GTGGATTCGC AAAGGGTAAG CAAAGTACAG ATTCCAACTA ACCCTAGAAT TGCTTCAAAC TTGCCATCAG GTTTTACCAA AATGGATAAA GATAGTACAG CAGCCAGTGC AGCCCAAGCA CCTGCATATG TTAGTGTTTC AATGCCAAAG CCTAAAGACC ATACCACTGC TATGCCTGAC CCTGGAACCT TCCCAAAATC GCTTCGTGGG TTTGTTGAGA GGGCTTTTGC ACGCTGCAAA GATGATAAAG AAAAGGCATC TTGCGAGGTT GCCCTGAGGA AGATCGTCAA AAAAGCTAAG GAGGATAATA CTCTTTATAC TCGAGATGGG GATACTGAGC CTCTCTCAAC TGTCACTATC ACAAATGTGA CTAACTCTGA GTCGAGCTCC ACTCAGCTTT CTTCGTTACA AAATAAGAGC CCAACAAGAC GACCCAAAAG TAGATGGGAG CCGTTAGTGG AAGGAAAACC TTTTGTGAAG CCAGCTTCAA CTTTTAGCAG TGCTGTTAAA TTTGGAGCTT CGAATCACCA AAATGAAAAC AACAAAAAGA GCTCTGAGAG TTTTCAAAAG GTGGATGCTG CCACTGGCTT CAAGCCCACT TATTCTGGGC AAAATTCTGC AAAAAAAAGT TTTCAGCGGC CTGTCAAGCG ACAGCGTTTT TCTGGTGGTG CAGCTACTGC CATTGATGAT GAGGCATCTA GTGATAGTGA CAAGGATTTG ACACCTTACT ATTCCAGTGC AATGGCACTT GCTAATTCTG CCGAGGAAAA GAAGCGACGT GATAGTCGTT CCAAGCGATT TGAAAAAGTT CAAGGCCACA ACCGAGGGAA TGATCTTACA AAACCTAAGA ATGCAAATGT TGGAAATTTG CATTCTAGAA GAGCCACTGC CTTGAGGCTT AGCAAATTTT TTGATGAAAG TGGCAGCAGA GCTGTAGAAG ACATTGACTG GGATGCACTA ACTGTTAAAG GCACTTGCCA GGAAATTGAG AAACGTTATC TCCGTCTGAC TTCTGCGCCA GATCCTGCCA CTGTAAGACC AGAAGATGTG TTGGCAAAAG CTCTAATAAT GGTTCAGGAT TCTCAAAAGA ATTATCTTTT TAAATGTGAT CAACTAAAGT CTATTCGCCA AGACCTCACA GTACAATGGA TACACAATCA TTTAACAGCT AAGGTTTATG AAACACATGC TAGATTGGCT TTGGAGGCAG GGGATTTATC TGAGTATAAT CAGTGCCTGT CACAGTTAAA AACTCTTTAT GCGGAAGATA TAGAAGGATG CTCTCTGGAG TTTGTTGCGT ACAGTCTACT CTATATACTC TACACTCTAA CAACAACCGA GAACTGCTAT CATCCATGTC CAGAAGATAA GAAGGATGAA GCAGTCAGAC ATGCTCTTTC AGTTCGTGCA GCTGTCACAT CAGGAAATTA TGTTATGTTC TTCAGACTCT ACAAGACTGC ACCGAACATG AATAGTTGCC TCATGGATCT CTATGTGGAG AAGATGTGTT ACAAGGCTGT GAATTTTATG TCGCGTAGTT GTCGTCCTAC AATCCCGGTC TCATACATAG TCCAAGTGGT GGGCTTTACT GGTGCTGCAA GCGAAGGTAC TGATGAAAAG GAGACTGATG GTATGGAGGA GTGTTAGGAA TGGCTAAAAA CTCATGGT 
Length2808
Protein Sequence
Protein Residue
Map Locationscaffold_5: 12295661.. 12301308
Download Sequence
A.thaliana
AGI-codeAT2G39340.1
DescriptionSAC3/GANP/Nin1/mts3/eIF-3 p25 family
TAIR curator summary
Alias[AtSAC3A][SAC3A][yeast Sac3 homolog A]
Gene coexpression
MR
MR Locus Description
64.3273 Ahg912233 beta carbonic anhydrase 3
66.1589 Ahg315354 Nucleoporin autopeptidase
99.559 Ahg495713
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression