| Annotation |
|---|
| Description | jgi|Araly1|495713|fgenesh2_kg.8__1529__AT5G56240.1 |
| Sequence |
CACATTTAGT GATAATACGT TTGTGGACTT ATATGGAACA CCAAGTGCTT CGTTCTTCTT CTTTCTCTCA ATCTCTTTCT TCTCTTCAAT GCTCTCTTTC TCTCTCTAAG AAGCCATTTC TTTTCTCTTG CCAAGAAAAA CCATCTAAGG TTTTAAGATA AGAGTCAGAT TTAGCTAGGT GATGATAAAG AAGATCTGGT GTTATGCGGA AGTATTTGGG AAGCGAAGAG GAAGAGGCAA ATAGTAACAG TGGAAGAATC AAATGTTCTT ATCCACTGAG AACCCACCAA ATGACCCACT TTCTTCTTCT TCTTCTCCTC CTTTCTTACA TCTCCCCACT TCTTCCCATG AGTTAGGTCA ATCCCATCTC TCCAATTTCT CCATCAGAGA TTACGCATAT AGTAACCGGA AGAACAACAT CAAGAACAAT TGGCCATTTT CCTCAAAAAG TCTCCAACTT TTCTCAACTC ATGGCATAAC TGATCCTTTG CCACCGTTAC AGAAAGTTTC CACCGTAAGT AACCAGTTTG AGACCAAGGC TAGTTCATCG TCGGGGAAGC AAATCGTATC CTATGTTCAT CATGGAAGAG ATTTGGCTAA ACTTGGGTTG AATCAGACAT TAGCAGAGAC TAGTAAAGGA GGAGTTAGTA GCCAATCAAG AATCATCGAG AATGGTTTGT TTTCGAGTAC AAGTGTTTCC AAGTCTGAAG TAGAGATAGT TGTAGCTGCT ACAAGTAACA AGAAGGACAA CCACAGTAAA AAGTGTGGAA GAGGGATGGT GAAATCTAAA GAAGATAGTT GTGGTGGCCT TGTGACGACT TCTGAATCAA TAATGGCTTC AAAAACATGT CCTATTTGCA AAACCTTCTC CTCAGCTTCT AACACAACTT TGAATGCTCA CATCGACCAG TGTTTGTCTG TTGACTCAGC ACTGCCACCG GTTGTTAGTA GTAAGCCAAA CAAGCCTAGA AGTAAGCCAC GGGTGAAAGT TAAAACGATG GTTGATATCT ACGCTTCTGC GAAAGAAGGC ACATTAGAAG ATCTTGATAA AAGAAATGGA ACAAAGTGGG TGTCGATTTT GAGTTATACA AATAGAGTTG TTGCTGAGAA GTCTGAAGTG TCTAAGAAGC GGAAAGTTTC GCCTGTTGGC GTTGGTCCGG TTTATATTGA TGCTAAGGGG CAGAAATTGC GGATTTTATC TGAGTTCAGC GAGAAGAAGA CTTCTACTAC TCCGTCGAGA GAACAGCATG AGGATGGTAG TGGTGGTAAG AAATGTTTAA GCCAAGGTAG TAAAGGAAAC AATAAATGCT TGAGGAAAAT TCGTCGAGTA AAGAAGCCTC ACAAGTATGT TAAACTAACC AATCACAAAG CTAATGCTCC AGAGATACCT GGAGATCAAA GAGGTTTTTC TGGAGAAGGT AGTCACACTG GTCATCATAG AATCCATAAT CAGCGGATGC TAGCGAAACG TGGTCTGATT TTGAAGAAGC TAAATGAGAA AGGACATGAT TTATATGGTT TGCGGGATCA GCTATCGGAT GATGAAGATA CATGGTCAGG AGGAGATCCT ACTGTGTTGA GAGGTACTGA TTTGTTTGCC ACAGATTCTT ATCCTTTATA TAAACAGAAG CTGGGGAGCG AAGTTGCTCG ACCAAAAAAG GCTTTGTTTG GGAGTAAAAG TGCTCAAAGT CGTTCATTTA GAGTCCCTCA GAGTGAAAAA GAAGATGAGT CACTTGAGGG AATTCAAATA AACACTCTCC GATTAAAGAA GAGCATTGCT TCATTTCAAG AAGATAAGTA TCCACCTGGA AAGAATTTCT GCTCAGATGC TGTAGATGTT TCAGATGCAT CTCCTCGTGG AACTAGCATG AGAAAGTTTT CCCCACCTTT TGTACCAAAT GCCTGGAGGC GACTATCTGT GCCTGTGGAG CTAAATAAAG CTCGGTTGGA TTTCTCGGAG GAAGAAGATG AAGAAGAAAC AGGGAAATGG GAATCTGAAA TGACTCAAGA ACGTGAGCTG CCAGATAATG ATTATGTTTC TGGTGATAAT GGAGAAAGAA ATGAGGTCTT ACTGAGATCA AATCCTTCAT CTAGTGGTTA CGATGATTAT AATGATGATG ACGACGAAAG TAGTGAAGAG GAAGAAGCTA ATAACAAAAG AGCTCATGTT TTGGACAAAA CTGATGATAT GGGTGCTGAG TTCTACCAGT CAGACAGTCC ACCATCTATT GAAATCTTAC CCAGAGAGCG AGCAATGTAT TACTCCGAAG TTGGGAATAT GATTTACGGG CAAACCTCTT GCAAGGAGAA TGAAAGGTTT GATTCTGAAG TTGGACAAGG AGGCTTATTT GTAGAGGTTG ATACCATTCC TATTCCAGGA CCTCCAGGAT CATTTTTACC AAGTCCTCGA GATATGGGTT TTGATGAGAA TCTTGGGAAC TCGTCGGTTA TCACAAGCCA GGTTCAGTCT TCCATGGATC AGCTTGACAG AAACTCATCT GAATCACCTG TTTCCGCAGT TTCAAACTTT GCAGCTGGTA GATTGAATTT TCCCGCAGAG TTATCTTCTA CTTTCCGAGA AAATTTCTCA CCGGATATTG CCATGTCCTA CTCAACAACC CCGATGAGCT TTTGTGTTCC ATCTCATTAT GGGACAACCG AGGCTGAGCC AATTACCATT GACAAGACAA CATTACCTTC CAGATTTAGA AACAATGATC AAGAGTCTTG TTGTTGCCAA AGAAAAGAGA GAATCTCCGA GGGCATTACT CGGAATCATC AAGGATCTCA CTTGCTGCAG CGAAGAGCAG CTTCTTCGTC AATCACGATG AACTTAACTA ATTCACCCAC ACGTTTGGAT CCAAATCATC CATTTGAGCA GTCACCATAC AAGATCCAAC AAGCTTTGGA TCTCCAGAGT AAGTTCTCCA GCAGAACGAA TCCCAACGCC GTTGTGCCTC CAAGTCCTTC TAACCCGGTT TTAAGGTTAA TGGGAAAAGA CTTGATGGTC ATGAACCAAG GAGAAGCAGA TGAAGAAGCA TCCCGGTCTA GCTTAACACC AACCCCTCAG TTTGTTGATC CTCCTTGTGG TGGAACTGGC TTATACTTCA ACACAGGTCT CTATTTAAGA AACAGTTTCG AGTCAACACA ACAACCACAA GCCCAAACCC AACCACAACC ACAACCACAA GCTGCAGCAT TCAGAAACAA TTTTGATCAT GTAAGATACT TTTCTCCGAG CTAGTCACCG TAAAGTTTCG ACCTTGATGC AGTGTAAGAA GCAACCGAGA AGTGGGTTCT CTTCGAAAAC CGATCATCAA ACATGGATGC ATTCGGGTTT TCATTTTCTA TGCTTCAACT CTTTCTGCAG AGACTTTGTG TAGTTACTAT TTACAAAAGA AAAAGCAAAC ACTTGAAAAT AACAAACACT CTGTAGAAGG ATAAGTAACT TAAGGCTTTT ATTGCCACCA AAGTTATCAA GTTATAGTTT ATCTTT |
| Length | 3496 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_8: 16345002.. 16349781 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G56240.2 |
| Description | |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 1.41421 |
Ahg937129 | metalloendopeptidases;zinc ion binding;DNA binding |
| 2.44949 |
Ahg336756 | |
| 4.24264 |
Ahg932895 | Tetratricopeptide repeat (TPR)-like superfamily protein |
| 4.3589 |
Ahg929017 | 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
| 5.47723 |
Ahg894037 | F-box protein 2 |
| 5.65685 |
Ahg493112 | Polyketide cyclase / dehydrase and lipid transport protein |
| 6.48074 |
Ahg487239 | HhH-GPD base excision DNA repair family protein |
| 7.2111 |
Ahg910878 | |
| 7.34847 |
Ahg495958 | HEAT/U-box domain-containing protein |
| 7.61577 |
Ahg471018 | |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|