Detail



ID : Ahg937992

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|937992|scaffold_502183.1
Sequence
AAGCATCCAA GCTGGAGATG AATGGCAAAA GCTTCTTCTA TCCGCCAATT CGTCACATCC AGATTCATCT CCCCCGGAAC GGGTCTGCTT AAGGGTTTCA AACTTGTCGA AGATTCCAAC TCTATTAAAC ACCTCTTCCA AGTCCACGCG AGGCTAATCA CCTCCGGTAA CTTCTGGGAT TCTTCTTGGG CTATCAGATT GTTGAAGTGT TCTTCGCGTT TTGGTGATTC TAGCTACACG CTTTCGATAT TCCGCAGCAT TGGGAAGCTT TACTGTGCAA ATCCCGTCTT TAAGGCTTAT TTGGTCTCTT CTTCTCCGAA ACAAGCGTTG GGGTTTTACT TCGATATACT GAGATTTGGT TTTGTTCCTG ATACTTACAC CTTCGTTTCA TTGGTTAGTT GTATCGAGAA GACTTGTTGC GTTGATTCTG GTAAAATGTG TCATGGGCAG GCTATTAAGC ATGGATGCGA TCAAGTTTTG CCTGTTCAAA ATTCGTTAAT TCATATGTAT ACTTGTTGTG GTGCTTTGGA TCTTGCAAAG AAGCTGTTTG TTGAAATTCC TAAGAGAGAT ATTGTGTCCT GGAACTCGAT AATCGCTGGG GCGGTGAGGA ATGGTGATGT TTTGTATGCT CACAAGTTGT TCGATGAAAT GCCTGAGAAA AACATGATTT CTTGGAATAT CATGATTAGC GCTTATTTAG GTGCTAATAA TCCCGGAGTT TCCATTAGTT TGTTCCGTGA GATGGTTGGA GCAGGGTTCC AAGGAAATGA GAGTACATTG GTTTTGTTGT TGAATGCTTG TGGCAGATCA GCTAGATTGA AGGAAGGTAG GTCGGTTCAT GCTTCTTTGA TAAGAACCTT TCTGAATTCG AGTGTAGTCA TTGATACAGC TCTTATTGAC ATGTATGGAA AGTGCAAGGA AGTAGATTTA GCACGTAGGA TATTCGATAG TTTATCTGTT AGGAACAAAG TAACGTGGAA TGTGATGATA TTGGCACATT GTCTTCACGG GCGTCCTGAA GATGGGCTCG AATTATTTGA AGCCATGATC GATGGGTTGC TTAGACCTGA TGAAGTGACA TTTGTTGGTG TTCTCTGCGG TTGTGCTAGA GCTGGGCTTG TTTATCAAGG ACAAAGTTAC TACTCCCTGA TGGTTGACGA GTTCGAGATC AAACCCAACT TTGGACACCA ATGGTGCATG GCTAATCTTT ACTCCAACGC CGGGTTCCCT GAAGAAGCAG AGGAAGCTCT GAAGAATCTG CCAGAGGAAG ATGTGACACC AGAATCTACA AAATGGGCAA ACTTGCTCAG CTCGTCGCGT TTCACAGTAA ACCCGGCTCT AGGGGAGAGG TTTGCCAAGT CCCTGATAGA GACAGATCCT TTGAACTACA AGTATTACCA TTTGCTGATG AACATTTACA GTGTTACGGG AAGGTGGGAG GATGTTAATA GAGTGAGAGA GGTGGTGAAG GAGAGGAAAA TAGGACGAAT ACCCGGGTGT GGCCTTGTGG ACTTGGAGGA GATAGTCCAT GGCCTTAGAC TAGGATGCAA AGAAGCAGAA AAAGTGATCA CTGAGACTAG TCTAGAACAA TGGTACAGTG ATTCACTGAC ATAATAAAGC TGCCCATAAG CTGGTCTG 
Length1638
Protein Sequence
Protein Residue
Map Locationscaffold_5: 14725101.. 14726735
Download Sequence
A.thaliana
AGI-codeAT3G51320.1
DescriptionPentatricopeptide repeat (PPR) superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
14.8661 Ahg493988 Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein
25.2982 Ahg926563 P-loop containing nucleoside triphosphate hydrolases superfamily protein
25.2982 Ahg929064 RNA-binding KH domain-containing protein
29.6648 Ahg344965
39.3827 Ahg493336 tRNA/rRNA methyltransferase (SpoU) family protein
48.9898 Ahg322676 nonsense-mediated mRNA decay NMD3 family protein
54.4426 Ahg318005 protein arginine methyltransferase 3
58.7622 Ahg323263 ribosomal protein S15A D
63.498 Ahg895780 zinc finger (MYND type) family protein / programmed cell death 2 C-terminal domain-containing protein
71.8888 Ahg472138
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression