| Annotation |
|---|
| Description | jgi|Araly1|322676|fgenesh1_pm.C_scaffold_5000220 |
| Sequence |
ATGTCAGTAA TGGATGAATC AGGCATGTTT AACGTTCAAC AAACCATTGG AAGTGTTTTG TGTTGCAAGT GTGGTGTTCC CATGGCACCA AACGCAGCCA ACATGTGTGT GAATTGTCTT CGTTCCGAAG TCGATATCAC CGAAGGTTTA CAGAAGAGTA TTCAGATCTT CTATTGCCCT GAATGTACTT GTTACTTACA ACCACCAAAG ACTTGGATCA AATGTCAATG GGAATCTAAA GAGCTCTTAA CTTTTTGTAT CAAGAGGTTG AAGAATCTTA ATAAGGTTAA GCTGAAGAAC GCGGAATTCG TTTGGACTGA GCCTCATTCC AAGAGGATTA AGGTTAAGTT GACTGTTCAA GCTGAGGTTC TTAACGGTGC TGTTCTTGAG CAGTCTTATC CTGTTGAGTA TACGGTTAGG GATAATCTGT GTGAGTCGTG TTCAAGGTTT CAGGCTAATC CTGATCAGTG GGTTGCTTCG GTTCAGCTTA GGCAGCATGT TTCACATAGG AGGACTTTCT TTTATCTCGA ACAGTTGATT CTTAGGCACG ATGCTGCTTC ACGTGCCATT AGAATCCAGC AGGTGGATCA GGGGATTGAT TTCTTCTTTG GGAATAAAAG TCATGCTAAT AGCTTTGTTG AGTTTCTGCG GAAAGTTGTC CCCATTGAAT ATCGTCAGGA CCAACAACTG GTGTCTCATG ATGTCAAGAG CAGTTTGTAC AACTATAAGT ACACTTACTC TGTTAAGATC TGTCCTGTTT GCCGTGAGGA TCTTGTATGC TTGCCTTCAA AAGTTGCTAG CGGCTTGGGG AACCTTGGTC CACTTGTGAT TTGCACAAAA GTATCTGATA ACATAACTCT ACTTGATCCG AGAACTCTAA GGTGTGCCTT CTTGGACGCG AGACAGTACT GGAGGTCTGG GTTCCGATCT GCGCTCACCA GTAGACAACT TGTCAAGTAC TTTGTGTTCG ATGTTGAACC ACCTGTTAGT GAAGCGACTG TTGGCGGACA AAAGTACGCT CTATCCTATG TCCAGATAGC CCGTGAATCA GACATTGGTA AGATGTTTTA TGTCCAAACT CATCTAGGAC ACATTCTGAA ACCTGGGGAT CAAGCTCTGG GTTATGACAT CTACGGAGCC AATGTGAACG ACAATGAAAT GGAGAAATAC CGTCTGAGTG TGAAGAATGG GCTTCCAGAA GCAATTCTGA TCAAGAAATG TTACGAGGAG CAGAGAGAGA GGAAGCAGAA GAAATCCCGT AACTGGAAGC TCAAGTCGCT TCCAATGGAA ATGGATGATT CAAGAGGCAG GGTTGATCCA GAGAAGACAG ACAAGGAATA CGAAGAGTTT TTGAGGGATC TTGAAGAAAA CCCTGAGCTA AGGTTCAACA TATCCTTGTA CAGGGACAAG GATTATCAAG CTTCTGAGAC TGCTTCAATG ACAGATGGAG AAGGTGCACC ATCTGTTCCA ATTGAGGAGT TGCTTGCTGA CCTTGACCTA AGTGAGGAGG AAGAAGACGA TGATGATGAC GAGGAGGACA TGGCTGAGTA A |
| Length | 1551 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_5: 1929220.. 1930770 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT2G03820.1 |
| Description | nonsense-mediated mRNA decay NMD3 family protein |
| TAIR curator summary | |
| Alias | [AtNMD3][NMD3][Nonsense-Mediated mRNA Decay 3] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 7.74597 |
Ahg923366 | elongator protein 2 |
| 7.74597 |
Ahg945361 | RNA-binding (RRM/RBD/RNP motifs) family protein |
| 10.7238 |
Ahg926900 | flavodoxin family protein / radical SAM domain-containing protein |
| 11.7473 |
Ahg477487 | TCP-1/cpn60 chaperonin family protein |
| 12.4097 |
Ahg495758 | Class II aminoacyl-tRNA and biotin synthetases superfamily protein |
| 13.3041 |
Ahg477959 | ARM repeat superfamily protein |
| 13.6382 |
Ahg928570 | defective in exine formation protein (DEX1) |
| 14.2829 |
Ahg951336 | cyclin dependent kinase group C2 |
| 20.2978 |
Ahg490823 | mitochondrial heat shock protein 70-1 |
| 20.5913 |
Ahg486162 | P-loop containing nucleoside triphosphate hydrolases superfamily protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
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