Detail



ID : Ahg938082

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938082|scaffold_502273.1
Sequence
ACTGAAGAGC CCCTTGAGTG TCTTCTGCGG CGAAAAAGAG AGCGAAGCTT GAAATCTCCG ATTAAGCCAT GAATGCTCCA GACCGATACG AGCGATTCGT CGTCCCTGAA GGAACCAAGA AGGTTTCTTA TGATAGGGAT ACGAAGATCA TCAATGCTGC TTCCTTCACG ATTGAGAGAG AAGACCATAC GATTGGAAAC ATTGTTCGCA TGCAACTTCA CCGTGACGAG AATGTCTTGT TTGCTGGATA TCAACTTCCT CATCCTCTCA AGTACAAAAT CATAGTGAGG ATTCACACAA CAAGCCAGTC TTCCCCAATG CAAGCATACA ACCAGGCCAT CAATGATTTG GACAAGGAGC TCGATTATTT GAAGAACCAG TTTGAGGCAG AGGTGGCCAA GTTTTCAAAT CAGTTTTAAG GAAGGAGTCC TCCATCAGCA CATCGGGAAA AACGTTTTAC ATTGTCTTTC GCTAAGCACC AACCACAGGG CTTATAATGA GCTTGTGAAA TTTTCCCCAG TTATGCTTTG TATAAATCAG AAACAAATCG CCCTGTAACT TGTTTTCACT CTTATGTTTC AACACCATTT GAGGATGCTA TGAAGTAAT 
Length609
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15071569.. 15072652
Download Sequence
A.thaliana
AGI-codeAT3G52090.2
DescriptionDNA-directed RNA polymerase, RBP11-like
TAIR curator summaryNon-catalytic subunit common to nuclear DNA-dependent RNA polymerases II, IV and V; homologous to budding yeast RPB11 and the E. oli RNA polymerase alpha subunit.
Alias[ATRPB13.6][NRPB11][NRPD11][NRPE11]
Gene coexpression
MR
MR Locus Description
17.8326 Ahg477902 Glycoprotein membrane precursor GPI-anchored
36.7696 Ahg323927 Ribosomal protein S21e
49.6588 Ahg952212 ribosomal protein L23AA
52.915 Ahg494941 Ribosomal protein L13 family protein
64.0625 Ahg930445 topoisomerase II
67.6461 Ahg476998 general regulatory factor 2
70.4344 Ahg950185 ATPase, V0 complex, subunit E
72.9383 Ahg942308 Ribosomal L18p/L5e family protein
77.4597 Ahg480193 O-Glycosyl hydrolases family 17 protein
80.2558 Ahg474292 Tudor/PWWP/MBT superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression