Detail



ID : Ahg938102

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|938102|scaffold_502293.1
Sequence
TTGAGGCAAA CCGGTAAACG ATGTCAACGC CGTCGCCGCC GCCGCAACGT ATCGGCTTGC CATGGCCGGA GCTCAACGAT GGTTTGGCAT ACAAGGATGT CATCTCTTCT TCTGAGTCAG AGTTAACGAC GGTGTCCGAT TTCTACTTCA CCAAATACAA GAGTTCAGCT CCATTGCTAG GGTGGATTCA ACGAATCCAA AACGGACAGA TACAAATTGA CGGTGAAGTT GTCAAAGATC CCAACACACT TCTTAGGAGT GGTTCCAAGT TAGTTTACCA TAGGCTTCCT TGGAAGGAAC CTGACACGCC ATACTCGCTA CAAGTTTTGT ATGAAGATGA TGATTTGATC GCTTTAAACA AGCCTTCTGG ACTTCAAGTA TTGCCCGGAG GACTTTTCCA GCAACGGACT GTGTTGACGC AGCTGCAGTG GTGTTTCCGT AAAAATGATT CTTACACTGG ATCGCATGAA TCACCACACC CTGTCCCTGT ACATCGACTG GGTAGAGGAA CTTCAGGTAT ACTTCTCTGT GCGAAGACAA AGCTTGCAAA AACTAAACTT GCAGCGTATT TTGCTGAGGG AACATCTCTT GTCGGGTCCG GCAACCTGGA TCAAGAGTGT GGAAAAGGAA GAAAACTATC AAAGATATAT CGAGCACTAG CAGATGGTAT AGTTGAAGAA AACGAGGTAG TAATCAAACA GCCTTTAGGA GTGGTTCGGT ATCCTGGGGT AGCAAAAGGA TTATATGTTG CTTCTCCGGA AGGCAAACCT GCTTTCAGCA AAGTAGCTGT TCTGGAGAGG GACAAGCAAA AGAATTGCAC GCTGGTTAAG GTAGAGATAC AATCTGGAAG ACCACATCAA ATCCGGATTC ATCTTGCATA CATGGGACAT CCCTTGGTAG CTAGTTATAA TTGTATGAGG GACCCTCTTT ATGTAGCAGG CGGCCAACCA AAGTGCTTTG ATCCCGATCT TGTAGATGAT GCTGTAGCCT TTGCCGAAGA TGGAGGTTAC AGAAGGCCAA ATCAGGCTGT TCCTGGGGAC TGTGGATATC ATCTGCATGC TCATCAAGTA GAGCTACCAA ACCTGTTGAA CACTCATAAG GTAGTAAAAA TTGTAGCACC TCTACCACCA ATCCTCCAAA CAAGTTGTGA GGCAGAAGAA AAGGGTTAAT CCTCCTGCAA GTGAAGTTGC ATTAGTCTTT CTTT 
Length1204
Protein Sequence
Protein Residue
Map Locationscaffold_5: 15139256.. 15142352
Download Sequence
A.thaliana
AGI-codeAT3G52260.3
DescriptionPseudouridine synthase family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.09902 Ahg496115 methyl-CPG-binding domain 7
10.7703 Ahg487621 myosin heavy chain-related
14.7986 Ahg941655 BTB-POZ and MATH domain 5
29.0861 Ahg944382 Tetratricopeptide repeat (TPR)-like superfamily protein
29.6648 Ahg941479 RAN GTPase activating protein 2
32.3265 Ahg482359 Alba DNA/RNA-binding protein
40.5832 Ahg311923 F-box family protein
46.9042 Ahg931248 UNC-50 family protein
51.9038 Ahg936621 methyltransferases
52.3068 Ahg489967 Protein of unknown function (DUF604)
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression