Detail



ID : Ahg944382

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|944382|scaffold_700611.1
Sequence
GGTGCGACTT CGCCGGAATT CATGGCTGCG ACTCTTCTGT CTCGTTGCTA CCGTATCTAC AATTGCGACG CGTGCAAGTG TGTTTCTTCC GAGAATCACC AGACCACGGG GAAACGAAGT CTCGAATTCG ACTCAAGATT CTCGAAACCA GTTCGGCTAG CTCTTCGAGA CCGATACAAG GTAACTAAGC AGCTCAATGA TCCTGCGCTC ACTCGGGCTT TACGTGGTTT CGCTGATTCT GGTCTCATGG AGGATGCACT CCAACTGTTC GATGAAATGA ACAAAGCTGA TACTTTTGTG TGGAATGTGA TGATTAAAGG TTTCACTAGC TGTGGGTTAT ACTTTGAAGC GCTTCAACTT TATTGCAGAA TGGTATTTTC AGGGGTCAAA GCTGATTCCT TTACTTATCC TTTCGTGATT AAATCGGTTA CAGGAATTTC GTCATTGGAA GAAGGGAAGA AGATTCACGC GATGGTGATC AAGCTTCGGT TTGTTTCAGA TGTTTACGTC TGTAATTCTC TTATATCTTT GTACATGAAG CTTGGGTGTG CTTGGGATGC AGAGAAAGTG TTCGAAGAAA TGCCTGAGAG AGACATTGTT TCGTGGAATT CCATGATTTC TGGATATCTT GCGCTTGAAG ATGGCTTTCG CTCGTTGATG CTATTTAAAG AAATGCTGAA ATTTGGGTTT AAGCCTGACA GGTTCAGTAC CATGAGCGCT CTTGGTGCTT GTTCTCATGT GTATAGTCCA AACATGGGAA AGGAGTTACA TTGCCACGCT GTTCGAAGTA GAATTGAAAC TGGTGATGTT ATGGTAATGA CATCAATCCT TGACATGTAC AGTAAATATG GTGAAGTGAG TTATGCAGAG AGAATATTTA AATGTATAAT CCAGAGGAAC ATCGTAGCTT GGAATGTTTT GATAGGATGT TATGCTAGAA ACAGCCGAGT CACTGATGCG TTTCTCTGCT TTCAGAAAAT GTCAGAGCAA AATGGGTTGC AGCCAGATGT TATTACATTG ATCAATCTGC TTCCTGCTTG TGCAATCTTG GAGGGTCGAA CAATTCACGG GTATGCTATG AGGAGAGGCT TTCTTCCTCA TATAGTATTG GATACTGCTC TGATTGATAT GTATGGAGAA TGGGGGCAGT TAAAATCAGC TGAGGTTATA TTTGATCGAA TAGCTGAAAA GAATTTGATC TCATGGAACT CGATTATTGC TGCTTATGTG CAGAACGGGA AGAACTATTC AGCCTTGGAG CTATTTCAAA AACTCTGGGA TTCATCGCTT CTACCTGATC CCACAACAAT TGCTAGTATT CTACCAGCTT ATGCAGAATC TCTATCCTTG AGTGAAGGTA GACAAATTCA TGCTTATATA GTTAAGTCTA GATGCGGGTC AAACACTATC ATCTTGAATT CACTCGTTCA CATGTATGCC ATGTGTGGTG ACCTTGAGGA TGCAAGAAAA TGTTTCAACC ACGTCTTGTT AAAGGATGTT GTTTCATGGA ACAGCATCAT CATGGCCTAT GCAGTACACG GTTTTGGGAG AATTTCGGTT TGCTTATTCT CAGAGATGAT TGCTTCTAAA GTAGATCCAA ACAAGAGCAC CTTTGCTTCA CTATTAGCAG CATGTAGCAT TTCTGGTATG GTTGATGAAG GATGGGAATA TTTCGAGTCG ATGAAAAGAG AATACGGGAT TGATCCTGGA ATAGAGCATT ATGGGTACAT GCTGGATCTC ATTGGCCGTA CAGGAAACTT CAGCTCAGCC AAGAGATTCA TTAGAGAAAT GCCATTTTTG CCAACAGCTC GGATTTGGGG ATCTTTGTTA AATGCAAGCA GAAACCATAA CGATATAACC GTAGCTGAAT TCGCGGCAGA ACAGATATTT AAGATGGAAC ACGATAACAC GGGATGTTAT GTCTTGCTTT TGAACATGTA TGCAGAAGCT CGAAGATGGG AAGATGTAAA TAGGATTAAG CTTCTCATGG AGAGCAAAGG CATATCCAGA ACATCAAGTC GCAGTACTGT TGAGGCGAAG AGCAAAACGC ATGTGTTAAC AAACGGAGAC AGATCCCACG TGGAGACAAA CAAGATCTAT GAAGTCTTAG ATATTGTCTC GAGGATGATT GGAGAAGAAG AAGAAGAAGA CAGTTATGTT CACTATGTCT CGAAGTTGAG ACGAGAGACT CTAGCTAAGA GCAGAAGCAA TTCACCAAGA AGACATTCGG TAAGGCTCGC CACGTGTTTT GGATTGATCT CTACGGAAAC GGGAAGAACA GTTACGGTGA GAAATAACAC GAGAATCTGC AGAAAATGTC ACGAGTTCTT GGAAAAAGCT TCGAAAATGA CAAGAAGAGA GATAGTTGTT GGAGATTCAA AGATTTTTCA TCACTTCTCC AATGGTCGCT GCTCGTGTGG AAATTACTGG TGAAAACACA GGTTGTGGCT AAAGT 
Length2455
Protein Sequence
Protein Residue
Map Locationscaffold_7: 2312488.. 2314964
Download Sequence
A.thaliana
AGI-codeAT4G35130.1
DescriptionTetratricopeptide repeat (TPR)-like superfamily protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
25.3772 Ahg497391 Protein of unknown function (DUF1313)
29.0861 Ahg938102 Pseudouridine synthase family protein
47.3286 Ahg351872 Leucine-rich repeat (LRR) family protein
62.3538 Ahg943129 Copper amine oxidase family protein
70.6541 Ahg487474 SET domain protein 38
80.2185 Ahg927449 Isocitrate/isopropylmalate dehydrogenase family protein
88.4195 Ahg485417 Leucine-rich repeat (LRR) family protein
89.7775 Ahg491275
93.787 Ahg934176
95.8123 Ahg947941 RING/U-box superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression